RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 GSSP48637 474 aa12.75□□□□□ -0.37
TOM1-215ENST00000491987 DVL1P1P54792 670 aaPredicted RBP12.75□□□□□ -0.37
TOM1-215ENST00000491987 PSG7Q13046 419 aa12.75□□□□□ -0.37
TOM1-215ENST00000491987 MEP1BQ16820 701 aa12.75□□□□□ -0.37
TOM1-215ENST00000491987 CCDC92Q53HC0 331 aaPredicted RBP12.75□□□□□ -0.37
TOM1-215ENST00000491987 FAM209AQ5JX71 171 aa12.75□□□□□ -0.37
TOM1-215ENST00000491987 PGBD2Q6P3X8 592 aa12.75□□□□□ -0.37
TOM1-215ENST00000491987 OR4K13Q8NH42 304 aa12.75□□□□□ -0.37
TOM1-215ENST00000491987 OR1F12Q8NHA8 337 aa12.75□□□□□ -0.37
TOM1-215ENST00000491987 GNPDA2Q8TDQ7 276 aa12.75□□□□□ -0.37
TOM1-215ENST00000491987 NSL1Q96IY1 281 aa12.75□□□□□ -0.37
TOM1-215ENST00000491987 SAMD8Q96LT4 415 aa12.75□□□□□ -0.37
TOM1-215ENST00000491987 MSL2Q9HCI7 577 aa12.75□□□□□ -0.37
TOM1-215ENST00000491987 SRA1Q9HD15 236 aaKnown RBP12.75□□□□□ -0.37
TOM1-215ENST00000491987 CYSLTR2Q9NS75 346 aa12.75□□□□□ -0.37
TOM1-215ENST00000491987 TBCCD1Q9NVR7 557 aa12.75□□□□□ -0.37
TOM1-215ENST00000491987 ACTR3BQ9P1U1 418 aa12.75□□□□□ -0.37
TOM1-215ENST00000491987 CGGBP1Q9UFW8 167 aaPredicted RBP12.75□□□□□ -0.37
TOM1-215ENST00000491987 TMEFF2Q9UIK5 374 aaPredicted RBP12.75□□□□□ -0.37
TOM1-215ENST00000491987 FBN1P35555 2871 aaKnown RBP12.75□□□□□ -0.37
TOM1-215ENST00000491987 OR6C6A6NF89 314 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 CLDN25C9JDP6 229 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 ARPC3O15145 178 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 RER1O15258 196 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 NOS3P29474 1203 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 LMO4P61968 165 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 TSPAN31Q12999 210 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 KCNMB1Q16558 191 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 HFEQ30201 348 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 MTX3Q5HYI7 312 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 ZNF620Q6ZNG0 422 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 RINLQ6ZS11 566 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 GLCCI1Q86VQ1 547 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 OR6V1Q8N148 313 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 CCDC197Q8NCU1 140 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 SDR9C7Q8NEX9 313 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 OR9Q2Q8NGE9 314 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 ELMOD3Q96FG2 381 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 FN3KQ9H479 309 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 RPRD1BQ9NQG5 326 aaKnown RBP12.74□□□□□ -0.37
TOM1-215ENST00000491987 B9D1Q9UPM9 204 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 STARD10Q9Y365 291 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 WIPI2Q9Y4P8 454 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 LYVE1Q9Y5Y7 322 aa12.74□□□□□ -0.37
TOM1-215ENST00000491987 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.73□□□□□ -0.373e-7■■■□□ 18.3
TOM1-215ENST00000491987 TCRBV5S2A0A599 114 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 TNFRSF11BO00300 401 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 DBHP09172 617 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 LIPAP38571 399 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 SPRNQ5BIV9 151 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 ZMAT1Q5H9K5 638 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 CLEC12AQ5QGZ9 265 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 SLC35F1Q5T1Q4 408 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 PGM2L1Q6PCE3 622 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 CORO6Q6QEF8 472 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 PHC2Q8IXK0 858 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 TMEM158Q8WZ71 300 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 CCL17Q92583 94 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 CMBLQ96DG6 245 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 EGLN1Q9GZT9 426 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 EGLN3Q9H6Z9 239 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 KLHL21Q9UJP4 597 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 PURGQ9UJV8 347 aaKnown RBP12.73□□□□□ -0.37
TOM1-215ENST00000491987 LHFPL6Q9Y693 200 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 ATRQ13535 2644 aa12.73□□□□□ -0.37
TOM1-215ENST00000491987 KRT36O76013 467 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 UBOX5O94941 541 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 FAM107AO95990 144 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 MSMBP08118 114 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 ADH4P08319 380 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 CALB2P22676 271 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 SRP14P37108 136 aaKnown RBP12.72□□□□□ -0.37
TOM1-215ENST00000491987 MAGEA2P43356 314 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 ERFP50548 548 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 HIST1H3AP68431 136 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 TNFAIP6P98066 277 aaPredicted RBP12.72□□□□□ -0.37
TOM1-215ENST00000491987 SRSF2Q01130 221 aaKnown RBP12.72□□□□□ -0.37
TOM1-215ENST00000491987 PPP1R8Q12972 351 aaKnown RBP12.72□□□□□ -0.37
TOM1-215ENST00000491987 HNRNPA0Q13151 305 aaKnown RBP12.72□□□□□ -0.37
TOM1-215ENST00000491987 HIST2H3PS2Q5TEC6 136 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 LCN8Q6JVE9 175 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 HIST2H3AQ71DI3 136 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 LINC00346Q8IVM7 164 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 ARHGAP24Q8N264 748 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 GJC3Q8NFK1 279 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 SLC26A10Q8NG04 563 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 OR52E2Q8NGJ4 325 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 OR4C15Q8NGM1 316 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 OR51F2Q8NH61 342 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 SPATA3Q8NHX4 192 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 RAB1CQ92928 201 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 TMEM186Q96B77 213 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 TIMD4Q96H15 378 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 COG8Q96MW5 612 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 DIRC2Q96SL1 478 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 BTBD10Q9BSF8 475 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 HDHD2Q9H0R4 259 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 ZNF665Q9H7R5 613 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 HIF1ANQ9NWT6 349 aa12.72□□□□□ -0.37
TOM1-215ENST00000491987 PTTG3PQ9NZH4 202 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms