RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 C8orf82Q6P1X6 216 aaPredicted RBP7.42□□□□□ -1.22
NUP50-217ENST00000491860 VASH1Q7L8A9 365 aaPredicted RBP7.42□□□□□ -1.22
NUP50-217ENST00000491860 FAM122BQ7Z309 247 aa7.42□□□□□ -1.22
NUP50-217ENST00000491860 IGFN1Q86VF2 1251 aa7.42□□□□□ -1.22
NUP50-217ENST00000491860 POU5F2Q8N7G0 328 aa7.42□□□□□ -1.22
NUP50-217ENST00000491860 ZNF283Q8N7M2 679 aa7.42□□□□□ -1.22
NUP50-217ENST00000491860 GJC3Q8NFK1 279 aa7.42□□□□□ -1.22
NUP50-217ENST00000491860 SEMA6DQ8NFY4 1073 aa7.42□□□□□ -1.22
NUP50-217ENST00000491860 SLC7A13Q8TCU3 470 aa7.42□□□□□ -1.22
NUP50-217ENST00000491860 POP5Q969H6 163 aaKnown RBP7.42□□□□□ -1.22
NUP50-217ENST00000491860 HAVCR1Q96D42 359 aa7.42□□□□□ -1.22
NUP50-217ENST00000491860 GPA33Q99795 319 aa7.42□□□□□ -1.22
NUP50-217ENST00000491860 PLA2G12AQ9BZM1 189 aa7.42□□□□□ -1.22
NUP50-217ENST00000491860 NSRP1Q9H0G5 558 aaKnown RBP7.42□□□□□ -1.22
NUP50-217ENST00000491860 HDHD2Q9H0R4 259 aa7.42□□□□□ -1.22
NUP50-217ENST00000491860 C7orf69Q9H7B7 122 aa7.42□□□□□ -1.22
NUP50-217ENST00000491860 NRIP3Q9NQ35 241 aa7.42□□□□□ -1.22
NUP50-217ENST00000491860 VSX1Q9NZR4 365 aaPredicted RBP7.42□□□□□ -1.22
NUP50-217ENST00000491860 RHCGQ9UBD6 479 aa7.42□□□□□ -1.22
NUP50-217ENST00000491860 PURGQ9UJV8 347 aaKnown RBP7.42□□□□□ -1.22
NUP50-217ENST00000491860 POLR1DQ9Y2S0 133 aa7.42□□□□□ -1.22
NUP50-217ENST00000491860 POLR3KQ9Y2Y1 108 aaPredicted RBP7.42□□□□□ -1.22
NUP50-217ENST00000491860 NOP16Q9Y3C1 178 aaKnown RBP7.42□□□□□ -1.22
NUP50-217ENST00000491860 DYSFO75923 2080 aa7.42□□□□□ -1.22
NUP50-217ENST00000491860 ZSCAN5BA6NJL1 495 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 CDC42EP2O14613 210 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 IDH3BO43837 385 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 SLC16A7O60669 478 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 PTP4A3O75365 173 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 FSTL3O95633 263 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 TXNDC12O95881 172 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 RENP00797 406 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 NGFP01138 241 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 IGHV2-70P01814 119 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 SELEP16581 610 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 ADRA2CP18825 462 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 MDH2P40926 338 aaKnown RBP7.41□□□□□ -1.22
NUP50-217ENST00000491860 SRP9P49458 86 aaKnown RBP7.41□□□□□ -1.22
NUP50-217ENST00000491860 PSME3P61289 254 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 ECH1Q13011 328 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 SLC36A3Q495N2 470 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 MESTQ5EB52 335 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 FGD3Q5JSP0 725 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 GLYATQ6IB77 296 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 SMARCD3Q6STE5 483 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 RBMS3Q6XE24 437 aaKnown RBP7.41□□□□□ -1.22
NUP50-217ENST00000491860 C1orf87Q8N0U7 546 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 CLDN22Q8N7P3 220 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 OR13G1Q8NGZ3 307 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 OR1F12Q8NHA8 337 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 APOBEC3DQ96AK3 386 aaPredicted RBP7.41□□□□□ -1.22
NUP50-217ENST00000491860 MCUR1Q96AQ8 359 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 CMBLQ96DG6 245 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 FAM46AQ96IP4 442 aaKnown RBP7.41□□□□□ -1.22
NUP50-217ENST00000491860 RSRC1Q96IZ7 334 aaKnown RBP7.41□□□□□ -1.22
NUP50-217ENST00000491860 Q96M85 177 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 COQ7Q99807 217 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 TMPRSS13Q9BYE2 586 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 SYT4Q9H2B2 425 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 GORASP2Q9H8Y8 452 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 TMEM106BQ9NUM4 274 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 DCAF13Q9NV06 445 aaKnown RBP7.41□□□□□ -1.22
NUP50-217ENST00000491860 NDE1Q9NXR1 346 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 IL20RAQ9UHF4 553 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 PPP1R3CQ9UQK1 317 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 SIGLEC7Q9Y286 467 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 ADAM18Q9Y3Q7 739 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 SNX13Q9Y5W8 968 aa7.41□□□□□ -1.22
NUP50-217ENST00000491860 UNC119BA6NIH7 251 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 LRRC30A6NM36 301 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 A8MXK9 166 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 H7C1C5 153 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 ARPC3O15145 178 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 ATP8B1O43520 1251 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 VENTXO95231 258 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 CTLA4P16410 223 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 SLC6A6P31641 620 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 OMPP47874 163 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 BTG1P62324 171 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 LCN6P62502 163 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 SRSF2Q01130 221 aaKnown RBP7.4□□□□□ -1.22
NUP50-217ENST00000491860 ZNF181Q2M3W8 571 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 SPATS1Q496A3 300 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 ESCO2Q56NI9 601 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 RPL13AP3Q6NVV1 102 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 TBPL2Q6SJ96 375 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 FBXW12Q6X9E4 464 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 JAZF1Q86VZ6 243 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 LRRC28Q86X40 367 aaPredicted RBP7.4□□□□□ -1.22
NUP50-217ENST00000491860 LINC00471Q8N535 108 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.4□□□□□ -1.22
NUP50-217ENST00000491860 OR2Z1Q8NG97 314 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 SGMS2Q8NHU3 365 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 GTF3AQ92664 365 aaKnown RBP7.4□□□□□ -1.22
NUP50-217ENST00000491860 GCDHQ92947 438 aaPredicted RBP7.4□□□□□ -1.22
NUP50-217ENST00000491860 ERGIC1Q969X5 290 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 PLEKHA8Q96JA3 519 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 DHRS1Q96LJ7 313 aa7.4□□□□□ -1.22
NUP50-217ENST00000491860 ZNF582Q96NG8 517 aaPredicted RBP7.4□□□□□ -1.22
NUP50-217ENST00000491860 MRI1Q9BV20 369 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms