RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 A0A0B4J203 849 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 ANKRD20A5PA0PJZ0 165 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 ANXA2P2A6NMY6 339 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 ACOT7O00154 380 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 TFECO14948 347 aaPredicted RBP9.55□□□□□ -0.88
USP4-214ENST00000491791 LDLRAD4O15165 306 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 CBR3O75828 277 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 KRT33AO76009 404 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 STK17BO94768 372 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 DHFRP00374 187 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 SERPINA7P05543 415 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 ANXA2P07355 339 aaKnown RBP9.55□□□□□ -0.88
USP4-214ENST00000491791 GSTT2BP0CG30 244 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 ARSBP15848 533 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 RPS27P42677 84 aaKnown RBP9.55□□□□□ -0.88
USP4-214ENST00000491791 MAGEB1P43366 347 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 MECP2P51608 486 aaKnown RBP9.55□□□□□ -0.88
USP4-214ENST00000491791 LSM6P62312 80 aaKnown RBP9.55□□□□□ -0.88
USP4-214ENST00000491791 RAC1P63000 192 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 MFGE8Q08431 387 aaPredicted RBP9.55□□□□□ -0.88
USP4-214ENST00000491791 CARTPTQ16568 116 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 GLT8D1Q68CQ7 371 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 JMJD6Q6NYC1 403 aaPredicted RBP9.55□□□□□ -0.88
USP4-214ENST00000491791 ZNF529Q6P280 563 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 DHRS13Q6UX07 377 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 Q6ZSR3 168 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 DCXRQ7Z4W1 244 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 SIAH3Q8IW03 269 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 ELMOD2Q8IZ81 293 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 OR51A4Q8NGJ6 313 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 SYNPRQ8TBG9 265 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 C11orf40Q8WZ69 217 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 TMEM54Q969K7 222 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 FOXRED1Q96CU9 486 aaPredicted RBP9.55□□□□□ -0.88
USP4-214ENST00000491791 OR2M2Q96R28 347 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 SF3B5Q9BWJ5 86 aaKnown RBP9.55□□□□□ -0.88
USP4-214ENST00000491791 GHITMQ9H3K2 345 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 C1orf198Q9H425 327 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 CDCP1Q9H5V8 836 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 FAM206AQ9NX38 181 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 MED29Q9NX70 200 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 CKLFQ9UBR5 152 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 FBLN5Q9UBX5 448 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 NUFIP1Q9UHK0 495 aaKnown RBP9.55□□□□□ -0.88
USP4-214ENST00000491791 ZNF107Q9UII5 783 aaPredicted RBP9.55□□□□□ -0.88
USP4-214ENST00000491791 DHDHQ9UQ10 334 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 LOXL2Q9Y4K0 774 aa9.55□□□□□ -0.88
USP4-214ENST00000491791 SMG1Q96Q15 3661 aaKnown RBP9.55□□□□□ -0.88
USP4-214ENST00000491791 LOC100289279A0A1B0GTE1 492 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 GJE1A6NN92 205 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 SHISA8B8ZZ34 492 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 H3BML4 177 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 SULT2B1O00204 365 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 TERTO14746 1132 aaKnown RBP9.54□□□□□ -0.88
USP4-214ENST00000491791 RRP8O43159 456 aaKnown RBP9.54□□□□□ -0.88
USP4-214ENST00000491791 TLX3O43711 291 aaPredicted RBP9.54□□□□□ -0.88
USP4-214ENST00000491791 MPZL1O95297 269 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 TCRBP04435 133 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 CELA2AP08217 269 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 CD3GP09693 182 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 CCL3P10147 92 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 SRD5A2P31213 254 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 SOX2P48431 317 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 B3GALT5-AS1P59052 145 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 RRAS2P62070 204 aaPredicted RBP9.54□□□□□ -0.88
USP4-214ENST00000491791 CSNK2A1P68400 391 aaPredicted RBP9.54□□□□□ -0.88
USP4-214ENST00000491791 HIST1H3AP68431 136 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 FMODQ06828 376 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 SNTB2Q13425 540 aaKnown RBP9.54□□□□□ -0.88
USP4-214ENST00000491791 CAMK2BQ13554 666 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 INPP5JQ15735 1006 aaPredicted RBP9.54□□□□□ -0.88
USP4-214ENST00000491791 TMEM176BQ3YBM2 270 aaPredicted RBP9.54□□□□□ -0.88
USP4-214ENST00000491791 HIST2H3PS2Q5TEC6 136 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 OR7E24Q6IFN5 339 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 HIST2H3AQ71DI3 136 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 NKAIN3Q8N8D7 197 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 OR10H5Q8NGA6 315 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 OR6M1Q8NGM8 313 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 OR1J4Q8NGS1 313 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 KCNE4Q8WWG9 221 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 FCAMRQ8WWV6 532 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 ORAI1Q96D31 301 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 MED30Q96HR3 178 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 ZFP3Q96NJ6 502 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 OR5B2Q96R09 309 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 NAA11Q9BSU3 229 aaPredicted RBP9.54□□□□□ -0.88
USP4-214ENST00000491791 GPR87Q9BY21 358 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 SLC22A13Q9Y226 551 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 RHBDD3Q9Y3P4 386 aa9.54□□□□□ -0.88
USP4-214ENST00000491791 A0A1B0GVC2 190 aa9.53□□□□□ -0.88
USP4-214ENST00000491791 TMEM269A0A1B0GVZ9 245 aa9.53□□□□□ -0.88
USP4-214ENST00000491791 CIB4A0PJX0 185 aa9.53□□□□□ -0.88
USP4-214ENST00000491791 OR2M5A3KFT3 312 aa9.53□□□□□ -0.88
USP4-214ENST00000491791 FAM172BPA6NC97 362 aa9.53□□□□□ -0.88
USP4-214ENST00000491791 A6NIN4 97 aa9.53□□□□□ -0.88
USP4-214ENST00000491791 ZNF814B7Z6K7 855 aa9.53□□□□□ -0.88
USP4-214ENST00000491791 C21orf140B9A014 251 aa9.53□□□□□ -0.88
USP4-214ENST00000491791 LINC01387J3KSC0 135 aa9.53□□□□□ -0.88
USP4-214ENST00000491791 SULT1C2O00338 296 aa9.53□□□□□ -0.88
USP4-214ENST00000491791 WNT11O96014 354 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms