RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 OR6C6A6NF89 314 aa15.26■□□□□ 0.03
HMGN1-219ENST00000491183 CLDN25C9JDP6 229 aa15.26■□□□□ 0.03
HMGN1-219ENST00000491183 DEAF1O75398 565 aaPredicted RBP15.26■□□□□ 0.03
HMGN1-219ENST00000491183 SRP14P37108 136 aaKnown RBP15.26■□□□□ 0.03
HMGN1-219ENST00000491183 HIST1H3AP68431 136 aa15.26■□□□□ 0.03
HMGN1-219ENST00000491183 CDK5R2Q13319 367 aa15.26■□□□□ 0.03
HMGN1-219ENST00000491183 MTX3Q5HYI7 312 aa15.26■□□□□ 0.03
HMGN1-219ENST00000491183 HIST2H3PS2Q5TEC6 136 aa15.26■□□□□ 0.03
HMGN1-219ENST00000491183 HIST2H3AQ71DI3 136 aa15.26■□□□□ 0.03
HMGN1-219ENST00000491183 DEFB107AQ8IZN7 70 aa15.26■□□□□ 0.03
HMGN1-219ENST00000491183 NPEPL1Q8NDH3 523 aa15.26■□□□□ 0.03
HMGN1-219ENST00000491183 OR1F12Q8NHA8 337 aa15.26■□□□□ 0.03
HMGN1-219ENST00000491183 CMBLQ96DG6 245 aa15.26■□□□□ 0.03
HMGN1-219ENST00000491183 OR52D1Q9H346 318 aa15.26■□□□□ 0.03
HMGN1-219ENST00000491183 SRA1Q9HD15 236 aaKnown RBP15.26■□□□□ 0.03
HMGN1-219ENST00000491183 CGGBP1Q9UFW8 167 aaPredicted RBP15.26■□□□□ 0.03
HMGN1-219ENST00000491183 PURGQ9UJV8 347 aaKnown RBP15.26■□□□□ 0.03
HMGN1-219ENST00000491183 ZDHHC8Q9ULC8 765 aa15.26■□□□□ 0.03
HMGN1-219ENST00000491183 B9D1Q9UPM9 204 aa15.26■□□□□ 0.03
HMGN1-219ENST00000491183 IGLV1-36A0A0B4J1U3 117 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 ARPC3O15145 178 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 RER1O15258 196 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 TIMM8AO60220 97 aaPredicted RBP15.25■□□□□ 0.03
HMGN1-219ENST00000491183 FABP3P05413 133 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 CD55P08174 381 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 DBHP09172 617 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 PCMT1P22061 227 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 TUBG1P23258 451 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 FPR3P25089 353 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 RRM2P31350 389 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 RBMXP38159 391 aaKnown RBP15.25■□□□□ 0.03
HMGN1-219ENST00000491183 GSSP48637 474 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 MEP1BQ16820 701 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 ACSM5Q6NUN0 579 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 Q6ZR03 302 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 OR6V1Q8N148 313 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 OR51F2Q8NH61 342 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 FANK1Q8TC84 345 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 RAB1CQ92928 201 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 MCUR1Q96AQ8 359 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 HAVCR1Q96D42 359 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 SAMD8Q96LT4 415 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 DIRC2Q96SL1 478 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 NMNAT3Q96T66 252 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 EGLN1Q9GZT9 426 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 TUBG2Q9NRH3 451 aa15.25■□□□□ 0.03
HMGN1-219ENST00000491183 OR10H3O60404 316 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 DCTN3O75935 186 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 IGHV2-5P01817 119 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 HIST1H1CP16403 213 aaKnown RBP15.24■□□□□ 0.03
HMGN1-219ENST00000491183 GSTM3P21266 225 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 KITLGP21583 273 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 CRABP1P29762 137 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 SLC6A6P31641 620 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 CENPAP49450 140 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 ERFP50548 548 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 C1orf94Q6P1W5 598 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 LEG1Q6P5S2 330 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 C16orf89Q6UX73 402 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 ZDHHC21Q8IVQ6 265 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 OR4K13Q8NH42 304 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 C19orf24Q9BVV8 132 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 REPIN1Q9BWE0 567 aaKnown RBP15.24■□□□□ 0.03
HMGN1-219ENST00000491183 G6PC2Q9NQR9 355 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 DCAF16Q9NXF7 216 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 LHFPL6Q9Y693 200 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 DYSFO75923 2080 aa15.24■□□□□ 0.03
HMGN1-219ENST00000491183 TRAV20A0A0B4J274 112 aa15.23■□□□□ 0.03
HMGN1-219ENST00000491183 PLPP2O43688 288 aa15.23■□□□□ 0.03
HMGN1-219ENST00000491183 AVPP01185 164 aa15.23■□□□□ 0.03
HMGN1-219ENST00000491183 ANPEPP15144 967 aa15.23■□□□□ 0.03
HMGN1-219ENST00000491183 HMGA2P52926 109 aa15.23■□□□□ 0.03
HMGN1-219ENST00000491183 TNFAIP6P98066 277 aaPredicted RBP15.23■□□□□ 0.03
HMGN1-219ENST00000491183 RSPO1Q2MKA7 263 aaPredicted RBP15.23■□□□□ 0.03
HMGN1-219ENST00000491183 SPATS1Q496A3 300 aa15.23■□□□□ 0.03
HMGN1-219ENST00000491183 ZMAT1Q5H9K5 638 aa15.23■□□□□ 0.03
HMGN1-219ENST00000491183 CORO6Q6QEF8 472 aa15.23■□□□□ 0.03
HMGN1-219ENST00000491183 C1orf229Q6ZS94 237 aaPredicted RBP15.23■□□□□ 0.03
HMGN1-219ENST00000491183 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.23■□□□□ 0.03
HMGN1-219ENST00000491183 RFLNBQ8N5W9 214 aa15.23■□□□□ 0.03
HMGN1-219ENST00000491183 FITM2Q8N6M3 262 aa15.23■□□□□ 0.03
HMGN1-219ENST00000491183 SLC26A10Q8NG04 563 aa15.23■□□□□ 0.03
HMGN1-219ENST00000491183 GNPDA2Q8TDQ7 276 aa15.23■□□□□ 0.03
HMGN1-219ENST00000491183 PTP4A1Q93096 173 aa15.23■□□□□ 0.03
HMGN1-219ENST00000491183 TIMD4Q96H15 378 aa15.23■□□□□ 0.03
HMGN1-219ENST00000491183 TMCC3Q9ULS5 477 aa15.23■□□□□ 0.03
HMGN1-219ENST00000491183 ARHGAP32A7KAX9 2087 aa15.23■□□□□ 0.03
HMGN1-219ENST00000491183 STAB1Q9NY15 2570 aa15.23■□□□□ 0.03
HMGN1-219ENST00000491183 OR6C68A6NDL8 312 aa15.22■□□□□ 0.03
HMGN1-219ENST00000491183 RENP00797 406 aa15.22■□□□□ 0.03
HMGN1-219ENST00000491183 ATP6V1B2P21281 511 aa15.22■□□□□ 0.03
HMGN1-219ENST00000491183 MXRA7P84157 204 aa15.22■□□□□ 0.03
HMGN1-219ENST00000491183 TSPAN31Q12999 210 aa15.22■□□□□ 0.03
HMGN1-219ENST00000491183 LIPNQ5VXI9 398 aa15.22■□□□□ 0.03
HMGN1-219ENST00000491183 FAHD2BQ6P2I3 314 aaPredicted RBP15.22■□□□□ 0.03
HMGN1-219ENST00000491183 PGBD2Q6P3X8 592 aa15.22■□□□□ 0.03
HMGN1-219ENST00000491183 DNM1P34Q6PK57 102 aa15.22■□□□□ 0.03
HMGN1-219ENST00000491183 CYP2R1Q6VVX0 501 aa15.22■□□□□ 0.03
HMGN1-219ENST00000491183 ZBTB46Q86UZ6 589 aa15.22■□□□□ 0.03
HMGN1-219ENST00000491183 GJC3Q8NFK1 279 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms