RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 NOX3Q9HBY0 568 aa16.24■□□□□ 0.19
MCF2L-230ENST00000491028 PNRC2Q9NPJ4 139 aaKnown RBP16.24■□□□□ 0.19
MCF2L-230ENST00000491028 DDX28Q9NUL7 540 aaKnown RBP16.24■□□□□ 0.19
MCF2L-230ENST00000491028 CHCHD3Q9NX63 227 aaKnown RBP16.24■□□□□ 0.19
MCF2L-230ENST00000491028 ERVK13-1Q9NX77 482 aa16.24■□□□□ 0.19
MCF2L-230ENST00000491028 ERVK-18Q9QC07 812 aa16.24■□□□□ 0.19
MCF2L-230ENST00000491028 CACNA1CQ13936 2221 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 A0A1W2PR80 420 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 CLEC18AA5D8T8 446 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 PTHP01270 115 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 IGKV3-15P01624 115 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 ROM1Q03395 351 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 SRSF1Q07955 248 aaKnown RBP eCLIP16.23■□□□□ 0.19
MCF2L-230ENST00000491028 ECH1Q13011 328 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 C3orf36Q3SXR2 165 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 PABPC1L2AQ5JQF8 200 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 CLEC18BQ6UXF7 455 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 VASH1Q7L8A9 365 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-230ENST00000491028 SSX6Q7RTT6 188 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 EGFL6Q8IUX8 553 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 RFLNBQ8N5W9 214 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 CLEC18CQ8NCF0 446 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 OR10S1Q8NGN2 331 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 SGCDQ92629 289 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 ZNF75AQ96N20 296 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 AMELYQ99218 206 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 COQ7Q99807 217 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 ATF6BQ99941 703 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 ALG8Q9BVK2 526 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 CDCA4Q9BXL8 241 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 CRNNQ9UBG3 495 aaPredicted RBP16.23■□□□□ 0.19
MCF2L-230ENST00000491028 NDRG3Q9UGV2 375 aa16.23■□□□□ 0.19
MCF2L-230ENST00000491028 IQCMA0A1B0GVH7 501 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 OR6C6A6NF89 314 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 SYNGR3O43761 229 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 ZNF254O75437 659 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 ADRA2AP08913 450 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 LIMS3P0CW19 117 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 LIMS4P0CW20 117 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 GRNP28799 593 aaKnown RBP16.22■□□□□ 0.19
MCF2L-230ENST00000491028 C21orf33P30042 268 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-230ENST00000491028 GRB2P62993 217 aaKnown RBP16.22■□□□□ 0.19
MCF2L-230ENST00000491028 MVKQ03426 396 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 CDONQ4KMG0 1287 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 ZNF774Q6NX45 483 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 TMEM154Q6P9G4 183 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 PLEKHG7Q6ZR37 379 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 KRT77Q7Z794 578 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 LHFPL3Q86UP9 236 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 ZNF679Q8IYX0 411 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 SYS1Q8N2H4 156 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 KLHL36Q8N4N3 616 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 AKR7LQ8NHP1 331 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 SNX33Q8WV41 574 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 ZNF649Q9BS31 505 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 MED18Q9BUE0 208 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 MROQ9BYG7 248 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 CCDC90BQ9GZT6 254 aa16.22■□□□□ 0.19
MCF2L-230ENST00000491028 NPDC1Q9NQX5 325 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-230ENST00000491028 CAB39Q9Y376 341 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-230ENST00000491028 KLF2Q9Y5W3 355 aaPredicted RBP16.22■□□□□ 0.19
MCF2L-230ENST00000491028 RELNP78509 3460 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 TMEM129A0AVI4 362 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 MYL12BO14950 172 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 SULT1C4O75897 302 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 IGLV1-44P01699 117 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 MT-ND2P03891 347 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 SERPINA5P05154 406 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 KRT8P05787 483 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 HTR1AP08908 422 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 H2BFMP0C1H6 154 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 ZNF14P17017 642 aaPredicted RBP16.21■□□□□ 0.19
MCF2L-230ENST00000491028 OPRL1P41146 370 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 HTR5AP47898 357 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 ETV1P50549 477 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 IRF3Q14653 427 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 ZNF684Q5T5D7 378 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 ZNF773Q6PK81 442 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 LRRN1Q6UXK5 716 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 TMPRSS11AQ6ZMR5 421 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 KCTD20Q7Z5Y7 419 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 OR52N1Q8NH53 320 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 OR1F12Q8NHA8 337 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 TTTY10Q9BZA0 68 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 NIPAL2Q9H841 368 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 CENPMQ9NSP4 180 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 IKZF2Q9UKS7 526 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 ERGIC3Q9Y282 383 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 SNX5Q9Y5X3 404 aa16.21■□□□□ 0.19
MCF2L-230ENST00000491028 PRR32B1ATL7 298 aa16.2■□□□□ 0.18
MCF2L-230ENST00000491028 DCTDP32321 178 aa16.2■□□□□ 0.18
MCF2L-230ENST00000491028 RIDAP52758 137 aaKnown RBP16.2■□□□□ 0.18
MCF2L-230ENST00000491028 RAB39AQ14964 217 aa16.2■□□□□ 0.18
MCF2L-230ENST00000491028 TAF13Q15543 124 aa16.2■□□□□ 0.18
MCF2L-230ENST00000491028 TBCEQ15813 527 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-230ENST00000491028 SEZ6L2Q6UXD5 910 aa16.2■□□□□ 0.18
MCF2L-230ENST00000491028 FAM220AQ7Z4H9 259 aa16.2■□□□□ 0.18
MCF2L-230ENST00000491028 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-230ENST00000491028 ZNF584Q8IVC4 421 aa16.2■□□□□ 0.18
MCF2L-230ENST00000491028 SVOPQ8N4V2 548 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms