RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 FAM220AQ7Z4H9 259 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 BTLAQ7Z6A9 289 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 WDFY1Q8IWB7 410 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 CNEP1R1Q8N9A8 125 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 HAVCR2Q8TDQ0 301 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 HDHD5Q9BXW7 423 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 PLGRKTQ9HBL7 147 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 ACOXLQ9NUZ1 547 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 KLHDC2Q9Y2U9 406 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 GRIP1Q9Y3R0 1128 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 ZNF175Q9Y473 711 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 PRR32B1ATL7 298 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 EIF1AYO14602 144 aaKnown RBP13.79□□□□□ -0.2
PCCB-218ENST00000490504 TNFSF11O14788 317 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 RAMP1O60894 148 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 KHDRBS3O75525 346 aaKnown RBP13.79□□□□□ -0.2
PCCB-218ENST00000490504 AQP8O94778 261 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 CDRT1O95170 752 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 VAMP5O95183 116 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 IGHG1P01857 330 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 CD1AP06126 327 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 CRHP06850 196 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 EPXP11678 715 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 ALOX5APP20292 161 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 EIF1AXP47813 144 aaKnown RBP13.79□□□□□ -0.2
PCCB-218ENST00000490504 TGM4P49221 684 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 SIRPAP78324 504 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 FMODQ06828 376 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 EGR3Q06889 387 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 SLC3A1Q07837 685 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 MRPL28Q13084 256 aaKnown RBP13.79□□□□□ -0.2
PCCB-218ENST00000490504 CDK5R1Q15078 307 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 TMEM91Q6ZNR0 172 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 DPY19L4Q7Z388 723 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 NOXO1Q8NFA2 376 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 OR6X1Q8NH79 312 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 OTOSQ8NHW6 89 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 S100ZQ8WXG8 99 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 SMIM19Q96E16 107 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 SLC25A44Q96H78 314 aaPredicted RBP13.79□□□□□ -0.2
PCCB-218ENST00000490504 ADGRG7Q96K78 797 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 RBP7Q96R05 134 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 MED18Q9BUE0 208 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 EMC6Q9BV81 110 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 MRPL13Q9BYD1 178 aaKnown RBP13.79□□□□□ -0.2
PCCB-218ENST00000490504 KCNN2Q9H2S1 579 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 CLEC4MQ9H2X3 399 aaPredicted RBP13.79□□□□□ -0.2
PCCB-218ENST00000490504 LIME1Q9H400 295 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 RNF122Q9H9V4 155 aa13.79□□□□□ -0.2
PCCB-218ENST00000490504 MRPL22Q9NWU5 206 aaKnown RBP13.79□□□□□ -0.2
PCCB-218ENST00000490504 COA3Q9Y2R0 106 aaPredicted RBP13.79□□□□□ -0.2
PCCB-218ENST00000490504 DOCK7Q96N67 2140 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 ZNF593O00488 134 aaPredicted RBP13.78□□□□□ -0.2
PCCB-218ENST00000490504 MSTNO14793 375 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 SULT1C4O75897 302 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 KRT8P05787 483 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 CD8BP10966 210 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 KLK2P20151 261 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 EDNRAP25101 427 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 RORCP51449 518 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 BMXP51813 675 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 CLRN1P58418 232 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 RAC3P60763 192 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 POU4F3Q15319 338 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 ETFDHQ16134 617 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 THEM4Q5T1C6 240 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 ESPNLQ6ZVH7 1005 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 MS4A15Q8N5U1 240 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 OR10D3Q8NH80 312 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 ASB17Q8WXJ9 295 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 PGLYRP3Q96LB9 341 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 FOXN4Q96NZ1 517 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 DCLRE1CQ96SD1 692 aaKnown RBP13.78□□□□□ -0.2
PCCB-218ENST00000490504 OPN3Q9H1Y3 402 aaPredicted RBP13.78□□□□□ -0.2
PCCB-218ENST00000490504 HMG20AQ9NP66 347 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 SNTG1Q9NSN8 517 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 KCNG2Q9UJ96 466 aa13.78□□□□□ -0.2
PCCB-218ENST00000490504 TEP1Q99973 2627 aaKnown RBP13.78□□□□□ -0.2
PCCB-218ENST00000490504 SLC35F4A4IF30 521 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 CGAP01215 116 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 PGA4P0DJD7 388 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 PGA3P0DJD8 388 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 SDC2P34741 201 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 GDI2P50395 445 aaKnown RBP13.77□□□□□ -0.21
PCCB-218ENST00000490504 ADAM8P78325 824 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 FAM27E3Q08E93 113 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 CAMK2DQ13557 499 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 ZNF846Q147U1 533 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 GUSBP1Q15486 140 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 ZNF829Q3KNS6 432 aaPredicted RBP13.77□□□□□ -0.21
PCCB-218ENST00000490504 SLC18B1Q6NT16 456 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 ZNF474Q6S9Z5 364 aaPredicted RBP13.77□□□□□ -0.21
PCCB-218ENST00000490504 YIPF7Q8N8F6 280 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 ZNF454Q8N9F8 522 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 SLC26A10Q8NG04 563 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 RPS4Y2Q8TD47 263 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 THEM6Q8WUY1 208 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 BORCS5Q969J3 196 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 SLC25A46Q96AG3 418 aa13.77□□□□□ -0.21
PCCB-218ENST00000490504 WDR12Q9GZL7 423 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms