RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 LINC00336Q6ZUF6 198 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 MBOAT2Q6ZWT7 520 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 ZNF547Q8IVP9 402 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 TRAM1L1Q8N609 369 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 TMEM104Q8NE00 496 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 FBXO36Q8NEA4 188 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 OR51L1Q8NGJ5 315 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 OR4S2Q8NH73 311 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 CD300LFQ8TDQ1 290 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 APH1BQ8WW43 257 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 TMEM230Q96A57 120 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 ISOC2Q96AB3 205 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 WFIKKN1Q96NZ8 548 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 ZIM3Q96PE6 472 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 NRTNQ99748 197 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 NANOGQ9H9S0 305 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 CD209Q9NNX6 404 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 NUFIP1Q9UHK0 495 aaKnown RBP2.92□□□□□ -1.94
XRN1-213ENST00000489241 KPTNQ9Y664 436 aa2.92□□□□□ -1.94
XRN1-213ENST00000489241 ERICH4A6NGS2 130 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 SLC22A20A6NK97 555 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 NME4O00746 187 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 TDP2O95551 362 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 EIF4EP06730 217 aaKnown RBP2.91□□□□□ -1.94
XRN1-213ENST00000489241 IVLP07476 585 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 TACSTD2P09758 323 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 ZDHHC11BP0C7U3 371 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 ZNF17P17021 662 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 ELK1P19419 428 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 GABRR2P28476 465 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 CSNK1DP48730 415 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 ZNF138P52744 262 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 IFT88Q13099 833 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 POU2AF1Q16633 256 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 TMEM183BQ1AE95 376 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 ZNF829Q3KNS6 432 aaPredicted RBP2.91□□□□□ -1.94
XRN1-213ENST00000489241 TMEM255AQ5JRV8 349 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 SLC25A25Q6KCM7 469 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 ABHD13Q7L211 337 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 CAMK2N1Q7Z7J9 78 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 TMEM183AQ8IXX5 376 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 VKORC1L1Q8N0U8 176 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 ARRDC1Q8N5I2 433 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 CSGALNACT2Q8N6G5 542 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 NPWQ8N729 165 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 OR52E2Q8NGJ4 325 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 GIMAP1Q8WWP7 306 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 TMEM158Q8WZ71 300 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 LRRC39Q96DD0 335 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 DYNLL2Q96FJ2 89 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 RNF185Q96GF1 192 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 ZNF414Q96IQ9 312 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 GAL3ST2Q9H3Q3 398 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 HAUS4Q9H6D7 363 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 DMAP1Q9NPF5 467 aaPredicted RBP2.91□□□□□ -1.94
XRN1-213ENST00000489241 LZTFL1Q9NQ48 299 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 ZMAT5Q9UDW3 170 aaKnown RBP2.91□□□□□ -1.94
XRN1-213ENST00000489241 PSG8Q9UQ74 426 aa2.91□□□□□ -1.94
XRN1-213ENST00000489241 BZW2Q9Y6E2 419 aaKnown RBP2.91□□□□□ -1.94
XRN1-213ENST00000489241 A6NDN8 102 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 NDUFS8O00217 210 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 ERI3O43414 337 aaKnown RBP2.9□□□□□ -1.95
XRN1-213ENST00000489241 ZNF861PO60384 105 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 CCDC172P0C7W6 258 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 PNMA6AP0CW24 399 aaPredicted RBP2.9□□□□□ -1.95
XRN1-213ENST00000489241 RAB3BP20337 219 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 CDKN2BP42772 138 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 CXCL5P42830 114 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 LHX2P50458 406 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 HMGCS1Q01581 520 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 TCP10Q12799 353 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 HSP90AA4PQ58FG1 418 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 DNAJC24Q6P3W2 148 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 C6orf120Q7Z4R8 191 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 KIF2BQ8N4N8 673 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 ASCC1Q8N9N2 400 aaKnown RBP2.9□□□□□ -1.95
XRN1-213ENST00000489241 OR10AD1Q8NGE0 317 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 ITFG1Q8TB96 612 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 TCP10LQ8TDR4 215 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 RPEQ96AT9 228 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 CREB3L1Q96BA8 519 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 ZNF317Q96PQ6 595 aaPredicted RBP2.9□□□□□ -1.95
XRN1-213ENST00000489241 CDC42EP4Q9H3Q1 356 aaKnown RBP2.9□□□□□ -1.95
XRN1-213ENST00000489241 ASB8Q9H765 288 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 UBE2ZQ9H832 354 aaPredicted RBP2.9□□□□□ -1.95
XRN1-213ENST00000489241 PATZ1Q9HBE1 687 aaKnown RBP2.9□□□□□ -1.95
XRN1-213ENST00000489241 CD84Q9UIB8 345 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 MROH7Q68CQ1 1323 aa2.9□□□□□ -1.95
XRN1-213ENST00000489241 CAMTA1Q9Y6Y1 1673 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 PANO1I0J062 215 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 LAD1O00515 517 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 GABRPO00591 440 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 CD5LO43866 347 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 SLC19A2O60779 497 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 MPDU1O75352 247 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 FABP3P05413 133 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 KLK1P06870 262 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 USF1P22415 310 aaPredicted RBP2.89□□□□□ -1.95
XRN1-213ENST00000489241 OMGP23515 440 aa2.89□□□□□ -1.95
XRN1-213ENST00000489241 CASQ1P31415 396 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms