RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 NOXO1Q8NFA2 376 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 NUP37Q8NFH4 326 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 OR13C2Q8NGS9 318 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 OR51A7Q8NH64 312 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 OR6X1Q8NH79 312 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 AKR7LQ8NHP1 331 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 HIST1H2ACQ93077 130 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 SLC25A44Q96H78 314 aaPredicted RBP5.06□□□□□ -1.6
CDHR3-213ENST00000488386 MPP4Q96JB8 637 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 LRR1Q96L50 414 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 DOK1Q99704 481 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 SH3GL1Q99961 368 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 PIMREGQ9BSJ6 248 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 PCDHAC1Q9H158 963 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 CCDC134Q9H6E4 229 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 RNF121Q9H920 327 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 DYNLRB1Q9NP97 96 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 INIPQ9NRY2 104 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 MAN2C1Q9NTJ4 1040 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 TMEM38BQ9NVV0 291 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 GID8Q9NWU2 228 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 BAG5Q9UL15 447 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 ZNF346Q9UL40 294 aaKnown RBP5.06□□□□□ -1.6
CDHR3-213ENST00000488386 MALRD1Q5VYJ5 2156 aa5.06□□□□□ -1.6
CDHR3-213ENST00000488386 RTTNQ86VV8 2226 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 SONP18583 2426 aaKnown RBP5.05□□□□□ -1.6
CDHR3-213ENST00000488386 HIVEP2P31629 2446 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 NSD1Q96L73 2696 aaPredicted RBP5.05□□□□□ -1.6
CDHR3-213ENST00000488386 NIPBLQ6KC79 2804 aaeCLIP5.05□□□□□ -1.6
CDHR3-213ENST00000488386 A0A1W2PPL8 197 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 A0A1W2PRG6 482 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 A8MV72 311 aaPredicted RBP5.05□□□□□ -1.6
CDHR3-213ENST00000488386 WNT9BO14905 357 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 UBL3O95164 117 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 STAMBPO95630 424 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 IGHG1P01857 330 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 SAGP10523 405 aaPredicted RBP5.05□□□□□ -1.6
CDHR3-213ENST00000488386 APEHP13798 732 aaKnown RBP5.05□□□□□ -1.6
CDHR3-213ENST00000488386 DAOP14920 347 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 ACADSP16219 412 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 SLC25A16P16260 332 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 ZNF26P17031 533 aaPredicted RBP5.05□□□□□ -1.6
CDHR3-213ENST00000488386 GATA3P23771 443 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 IGFBP5P24593 272 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 COL8A2P25067 703 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 NR4A2P43354 598 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 MAGEB1P43366 347 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 PPOXP50336 477 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 PSME3P61289 254 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 ERVK-25P63136 954 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 SELENOWP63302 87 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 MXRA7P84157 204 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 GALK2Q01415 458 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 LOXL1Q08397 574 aaPredicted RBP5.05□□□□□ -1.6
CDHR3-213ENST00000488386 CD47Q08722 323 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 FOXI1Q12951 378 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 FHL1Q13642 323 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 CCNIQ14094 377 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 EFNB3Q15768 340 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 SGCAQ16586 387 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 ALG10Q5BKT4 473 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 TMEM255AQ5JRV8 349 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 KHDC1LQ5JSQ8 128 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 SPATA46Q5T0L3 261 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 ARMC4Q5T2S8 1044 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 C8orf82Q6P1X6 216 aaPredicted RBP5.05□□□□□ -1.6
CDHR3-213ENST00000488386 UGT2A3Q6UWM9 527 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 SLC16A14Q7RTX9 510 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 LRRC75AQ8NAA5 344 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 SLC30A7Q8NEW0 376 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 OR4F15Q8NGB8 312 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 RP9Q8TA86 221 aaKnown RBP5.05□□□□□ -1.6
CDHR3-213ENST00000488386 RASSF5Q8WWW0 418 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 LINC00476Q8WZB0 136 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 FAM162AQ96A26 154 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 MRPL24Q96A35 216 aaKnown RBP5.05□□□□□ -1.6
CDHR3-213ENST00000488386 MSI2Q96DH6 328 aaKnown RBP5.05□□□□□ -1.6
CDHR3-213ENST00000488386 BPIFA2Q96DR5 249 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 PRRC1Q96M27 445 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 SNX18Q96RF0 628 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 MRPL13Q9BYD1 178 aaKnown RBP5.05□□□□□ -1.6
CDHR3-213ENST00000488386 ZNF442Q9H7R0 627 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 EVA1AQ9H8M9 152 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 TREM2Q9NZC2 230 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 IL20RAQ9UHF4 553 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 PRDM4Q9UKN5 801 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 MED31Q9Y3C7 131 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 ADAM18Q9Y3Q7 739 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 CMAHPQ9Y471 501 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 UGT2A1Q9Y4X1 527 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 FKBP7Q9Y680 259 aa5.05□□□□□ -1.6
CDHR3-213ENST00000488386 TRGV11A0A075B6L2 103 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 A0A087WUU8 490 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 A0A1W2PPW3 197 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 EFCAB9A8MZ26 197 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 CDC42EP2O14613 210 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 TLX2O43763 284 aaPredicted RBP5.04□□□□□ -1.6
CDHR3-213ENST00000488386 MGRN1O60291 552 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 PDE5AO76074 875 aa5.04□□□□□ -1.6
CDHR3-213ENST00000488386 NPPAP01160 153 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms