RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 MMP17Q9ULZ9 603 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 FARSAQ9Y285 508 aaKnown RBP12.8□□□□□ -0.36
RER1-207ENST00000488353 COL4A2P08572 1712 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 LAMA1P25391 3075 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 CACNA1IQ9P0X4 2223 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 OR4C45A6NMZ5 311 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 PHYHO14832 338 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 ARPC3O15145 178 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 ALOX12BO75342 701 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 IGHV4-34P06331 123 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 PPICP45877 212 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 F2RL1P55085 397 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 ELOCQ15369 112 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 RAB11BQ15907 218 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 DEFB110Q30KQ9 67 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 ACER2Q5QJU3 275 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 OR10K2Q6IF99 312 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 KIRREL2Q6UWL6 708 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 SLC16A9Q7RTY1 509 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 TMEM151BQ8IW70 566 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 CA13Q8N1Q1 262 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 ZPLD1Q8TCW7 415 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 NUDCD2Q8WVJ2 157 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 DCUN1D4Q92564 292 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 MCHR2Q969V1 340 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 ANKRD9Q96BM1 317 aaPredicted RBP12.8□□□□□ -0.36
RER1-207ENST00000488353 CHMP1AQ9HD42 196 aaPredicted RBP12.8□□□□□ -0.36
RER1-207ENST00000488353 DNAJB12Q9NXW2 375 aaKnown RBP12.8□□□□□ -0.36
RER1-207ENST00000488353 PCDHGA1Q9Y5H4 931 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 MTCH2Q9Y6C9 303 aa12.8□□□□□ -0.36
RER1-207ENST00000488353 TRBV6-7A0A0A0MS04 114 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 A0A0B4J2A0 478 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 C9orf170A2RU37 121 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 TMEM212A6NML5 194 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 SLC17A2O00624 439 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 KCNAB3O43448 404 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 IL2RAP01589 272 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 IGHV2-5P01817 119 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 ZNF14P17017 642 aaPredicted RBP12.79□□□□□ -0.36
RER1-207ENST00000488353 PMELP40967 661 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 EIF2S3P41091 472 aaKnown RBP12.79□□□□□ -0.36
RER1-207ENST00000488353 MAP3K8P41279 467 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 PPP1R1AQ13522 171 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 ISXQ2M1V0 245 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 FAM76BQ5HYJ3 339 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 ZNF511Q8NB15 262 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 PMM1Q92871 262 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 PRRT1Q99946 306 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 NAA11Q9BSU3 229 aaPredicted RBP12.79□□□□□ -0.36
RER1-207ENST00000488353 TRIM2Q9C040 744 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 CYTL1Q9NRR1 136 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 ASH2LQ9UBL3 628 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 SHPKQ9UHJ6 478 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 ZNF346Q9UL40 294 aaKnown RBP12.79□□□□□ -0.36
RER1-207ENST00000488353 CSAG2Q9Y5P2 127 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 DMRT1Q9Y5R6 373 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 A0A1W2PPE3 182 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 C4orf47A7E2U8 309 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 EEF1E1-BLOC1S5C9J1V9 151 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 TNFRSF10CO14798 259 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 PRKNO60260 465 aaPredicted RBP12.79□□□□□ -0.36
RER1-207ENST00000488353 CRHP06850 196 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 LIPCP11150 499 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 CPT2P23786 658 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 AVPR2P30518 371 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 CSNK1EP49674 416 aaKnown RBP12.79□□□□□ -0.36
RER1-207ENST00000488353 PSG6Q00889 435 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 C1orf61Q13536 156 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 ELAVL1Q15717 326 aaKnown RBP12.79□□□□□ -0.36
RER1-207ENST00000488353 TMEM244Q5VVB8 128 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 ZNF627Q7L945 461 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 LILRB2Q8N423 598 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 FAM160A2Q8N612 972 aaPredicted RBP12.79□□□□□ -0.36
RER1-207ENST00000488353 OR51A4Q8NGJ6 313 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 OR9A4Q8NGU2 314 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 OR2G2Q8NGZ5 317 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 OR10AC1Q8NH08 325 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 THRSPQ92748 146 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 FBXO17Q96EF6 278 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 SLC6A7Q99884 636 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 MICU1Q9BPX6 476 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 LAT2Q9GZY6 243 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 VSIG4Q9Y279 399 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 WIF1Q9Y5W5 379 aa12.79□□□□□ -0.36
RER1-207ENST00000488353 A0A1B0GTH9 108 aa12.78□□□□□ -0.36
RER1-207ENST00000488353 TVP23AA6NH52 213 aa12.78□□□□□ -0.36
RER1-207ENST00000488353 MFNGO00587 321 aa12.78□□□□□ -0.36
RER1-207ENST00000488353 CLN5O75503 358 aa12.78□□□□□ -0.36
RER1-207ENST00000488353 NKX2-2O95096 273 aa12.78□□□□□ -0.36
RER1-207ENST00000488353 ABHD16AO95870 558 aa12.78□□□□□ -0.36
RER1-207ENST00000488353 PGDP52209 483 aa12.78□□□□□ -0.36
RER1-207ENST00000488353 ADAM8P78325 824 aa12.78□□□□□ -0.36
RER1-207ENST00000488353 MEF2DQ14814 521 aa12.78□□□□□ -0.36
RER1-207ENST00000488353 RHOUQ7L0Q8 258 aa12.78□□□□□ -0.36
RER1-207ENST00000488353 TDHQ8IZJ6 230 aa12.78□□□□□ -0.36
RER1-207ENST00000488353 CSNK1A1LQ8N752 337 aa12.78□□□□□ -0.36
RER1-207ENST00000488353 RLN3Q8WXF3 142 aa12.78□□□□□ -0.36
RER1-207ENST00000488353 SGK3Q96BR1 496 aa12.78□□□□□ -0.36
RER1-207ENST00000488353 RASD2Q96D21 266 aa12.78□□□□□ -0.36
RER1-207ENST00000488353 SMIM8Q96KF7 97 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms