RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 IL24Q13007 206 aa1.03□□□□□ -2.24
SMC4-219ENST00000487747 EGFL6Q8IUX8 553 aa1.03□□□□□ -2.24
SMC4-219ENST00000487747 SLC35G3Q8N808 338 aa1.03□□□□□ -2.24
SMC4-219ENST00000487747 SDR9C7Q8NEX9 313 aa1.03□□□□□ -2.24
SMC4-219ENST00000487747 OR2L3Q8NG85 312 aa1.03□□□□□ -2.24
SMC4-219ENST00000487747 OR1L6Q8NGR2 347 aa1.03□□□□□ -2.24
SMC4-219ENST00000487747 PIBF1Q8WXW3 757 aa1.03□□□□□ -2.24
SMC4-219ENST00000487747 GALNT14Q96FL9 552 aa1.03□□□□□ -2.24
SMC4-219ENST00000487747 IFT74Q96LB3 600 aa1.03□□□□□ -2.24
SMC4-219ENST00000487747 SLC39A3Q9BRY0 314 aa1.03□□□□□ -2.24
SMC4-219ENST00000487747 NPTNQ9Y639 398 aa1.03□□□□□ -2.24
SMC4-219ENST00000487747 BAZ2AQ9UIF9 1905 aaKnown RBP1.03□□□□□ -2.25
SMC4-219ENST00000487747 FAM47DPA6NHR8 397 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 PCP4L1A6NKN8 68 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 F6UB75 175 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 PSTPIP1O43586 416 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 CALM1P0DP23 149 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 CALM2P0DP24 149 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 CALM3P0DP25 149 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 TCP1P17987 556 aaKnown RBP1.02□□□□□ -2.25
SMC4-219ENST00000487747 RAB3BP20337 219 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 KCNJ2P63252 427 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 CRADDP78560 199 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 CDH17Q12864 832 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 CHIT1Q13231 466 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 CLINT1Q14677 625 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 CTSL3PQ5NE16 218 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 Q6ZSR3 168 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 PDIK1LQ8N165 341 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 VWDEQ8N2E2 1590 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 MS4A15Q8N5U1 240 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 TTLQ8NG68 377 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 STMN2Q93045 179 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 PTX4Q96A99 478 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 PKMYT1Q99640 499 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 VCX2Q9H322 139 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 FAM49BQ9NUQ9 324 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 BLOC1S6Q9UL45 172 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 CLEC4AQ9UMR7 237 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 MAPK8IP3Q9UPT6 1336 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 KCNE3Q9Y6H6 103 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 TENM3Q9P273 2699 aa1.02□□□□□ -2.25
SMC4-219ENST00000487747 KANK1Q14678 1352 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 C4orf51C9J302 202 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 CXCL11O14625 94 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 MTX2O75431 263 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 REM1O75628 298 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 CLPXO76031 633 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 IL1BP01584 269 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 ZNF43P17038 809 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 IFNAR2P48551 515 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 GBX2P52951 348 aaPredicted RBP1.01□□□□□ -2.25
SMC4-219ENST00000487747 AIF1P55008 147 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 PPP1CBP62140 327 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 MRPS22P82650 360 aaKnown RBP1.01□□□□□ -2.25
SMC4-219ENST00000487747 SLC25A11Q02978 314 aaKnown RBP1.01□□□□□ -2.25
SMC4-219ENST00000487747 MPV17L2Q567V2 206 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 THEM4Q5T1C6 240 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 AVPI1Q5T686 147 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 WDR59Q6PJI9 974 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 KDELC1Q6UW63 502 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 PPP1R42Q7Z4L9 355 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 TGIF2LXQ8IUE1 241 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 ZCCHC7Q8N3Z6 543 aaKnown RBP1.01□□□□□ -2.25
SMC4-219ENST00000487747 BHLHE23Q8NDY6 225 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 FBXL13Q8NEE6 735 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 OR1S2Q8NGQ3 325 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 RHEBL1Q8TAI7 183 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 PLPPR1Q8TBJ4 325 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 UBE2Q2Q8WVN8 375 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 TRIM44Q96DX7 344 aaPredicted RBP1.01□□□□□ -2.25
SMC4-219ENST00000487747 DUS3LQ96G46 650 aaKnown RBP1.01□□□□□ -2.25
SMC4-219ENST00000487747 ZFP3Q96NJ6 502 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 CRACR2AQ9BSW2 395 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 ROPN1BQ9BZX4 212 aaPredicted RBP1.01□□□□□ -2.25
SMC4-219ENST00000487747 ZSCAN16Q9H4T2 348 aaPredicted RBP1.01□□□□□ -2.25
SMC4-219ENST00000487747 C21orf62Q9NYP8 219 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 SLC7A8Q9UHI5 535 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 ING4Q9UNL4 249 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 ST3GAL6Q9Y274 331 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 TMED5Q9Y3A6 229 aa1.01□□□□□ -2.25
SMC4-219ENST00000487747 CNTNAP1P78357 1384 aa1□□□□□ -2.25
SMC4-219ENST00000487747 BTBD17A6NE02 478 aa1□□□□□ -2.25
SMC4-219ENST00000487747 DYNC1I1O14576 645 aa1□□□□□ -2.25
SMC4-219ENST00000487747 DPM1O60762 260 aa1□□□□□ -2.25
SMC4-219ENST00000487747 EEDO75530 441 aaKnown RBP1□□□□□ -2.25
SMC4-219ENST00000487747 SURF6O75683 361 aaKnown RBP1□□□□□ -2.25
SMC4-219ENST00000487747 NDUFB10O96000 172 aa1□□□□□ -2.25
SMC4-219ENST00000487747 LHBP01229 141 aa1□□□□□ -2.25
SMC4-219ENST00000487747 IGLV2-8P01709 118 aa1□□□□□ -2.25
SMC4-219ENST00000487747 FGGP02679 453 aa1□□□□□ -2.25
SMC4-219ENST00000487747 OR5H8P0DN80 308 aa1□□□□□ -2.25
SMC4-219ENST00000487747 ZNF35P13682 527 aa1□□□□□ -2.25
SMC4-219ENST00000487747 GPX4P36969 197 aaPredicted RBP1□□□□□ -2.25
SMC4-219ENST00000487747 HNMTP50135 292 aa1□□□□□ -2.25
SMC4-219ENST00000487747 ARFIP1P53367 373 aa1□□□□□ -2.25
SMC4-219ENST00000487747 PLP1P60201 277 aa1□□□□□ -2.25
SMC4-219ENST00000487747 RPL23AP62750 156 aaKnown RBP1□□□□□ -2.25
SMC4-219ENST00000487747 PRR3P79522 188 aaKnown RBP1□□□□□ -2.25
SMC4-219ENST00000487747 IMMTQ16891 758 aaKnown RBP1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms