RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 MED4Q9NPJ6 270 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 TUBG2Q9NRH3 451 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 COA3Q9Y2R0 106 aaPredicted RBP10.29□□□□□ -0.76
VPS16-208ENST00000487461 ENPP4Q9Y6X5 453 aa10.29□□□□□ -0.76
VPS16-208ENST00000487461 PPIAL4EA0A075B759 164 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 PPIAL4CA0A0B4J2A2 164 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 TEX13CA0A0J9YWL9 993 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 PPIAL4DF5H284 164 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 TRAPPC2LH3BP13 241 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 SLC16A7O60669 478 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 FOXH1O75593 365 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 PPIAL4FP0DN26 164 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 LIMS1P48059 325 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 ERFP50548 548 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 CCDC92Q53HC0 331 aaPredicted RBP10.28□□□□□ -0.76
VPS16-208ENST00000487461 C1orf94Q6P1W5 598 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 RRM2BQ7LG56 351 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 TREML1Q86YW5 311 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 BPIFB2Q8N4F0 458 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 ZNF283Q8N7M2 679 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 DEFB108BQ8NET1 73 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 OR1F12Q8NHA8 337 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 ITLN1Q8WWA0 313 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 DVL3Q92997 716 aaPredicted RBP10.28□□□□□ -0.76
VPS16-208ENST00000487461 JMJD8Q96S16 334 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 SYT4Q9H2B2 425 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 ANKRD19PQ9H560 264 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 RERGLQ9H628 205 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 CCDC134Q9H6E4 229 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 EFCAB1Q9HAE3 211 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 PATZ1Q9HBE1 687 aaKnown RBP10.28□□□□□ -0.76
VPS16-208ENST00000487461 NRIP3Q9NQ35 241 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 PLEK2Q9NYT0 353 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 ASH2LQ9UBL3 628 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 SIGLEC7Q9Y286 467 aa10.28□□□□□ -0.76
VPS16-208ENST00000487461 TRBV4-1A0A0J9YWV2 114 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 A0A1W2PRQ8 180 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 OR6C6A6NF89 314 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 KHDRBS3O75525 346 aaKnown RBP10.27□□□□□ -0.77
VPS16-208ENST00000487461 NDUFB2O95178 105 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 H1F0P07305 194 aaKnown RBP10.27□□□□□ -0.77
VPS16-208ENST00000487461 DBHP09172 617 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 TNFSF4P23510 183 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 FPR2P25090 351 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 SDHAP31040 664 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 CDKN2AP42771 156 aaKnown RBP10.27□□□□□ -0.77
VPS16-208ENST00000487461 OMPP47874 163 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 SLC6A9P48067 706 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 SEC61A1P61619 476 aaKnown RBP10.27□□□□□ -0.77
VPS16-208ENST00000487461 LSM6P62312 80 aaKnown RBP10.27□□□□□ -0.77
VPS16-208ENST00000487461 AQP6Q13520 282 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 KRR1Q13601 381 aaKnown RBP10.27□□□□□ -0.77
VPS16-208ENST00000487461 DGCR6Q14129 220 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 HLXQ14774 488 aaPredicted RBP10.27□□□□□ -0.77
VPS16-208ENST00000487461 ZMYND11Q15326 602 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 TUSC1Q2TAM9 212 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 TMEM155Q4W5P6 130 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 GPR139Q6DWJ6 353 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 PTCHD4Q6ZW05 846 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 CYP4Z1Q86W10 505 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 GLB1L2Q8IW92 636 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 OR5AS1Q8N127 324 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 C3orf56Q8N813 242 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 FAM162AQ96A26 154 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 SIGLEC11Q96RL6 698 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 KCTD14Q9BQ13 255 aaPredicted RBP10.27□□□□□ -0.77
VPS16-208ENST00000487461 NUAK2Q9H093 628 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 VSX1Q9NZR4 365 aaPredicted RBP10.27□□□□□ -0.77
VPS16-208ENST00000487461 NDUFAF4Q9P032 175 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.27□□□□□ -0.77
VPS16-208ENST00000487461 IL19Q9UHD0 177 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 IL20RAQ9UHF4 553 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 TMEM5Q9Y2B1 443 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 POLR3KQ9Y2Y1 108 aaPredicted RBP10.27□□□□□ -0.77
VPS16-208ENST00000487461 IER3IP1Q9Y5U9 82 aa10.27□□□□□ -0.77
VPS16-208ENST00000487461 SOCS2O14508 198 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 RER1O15258 196 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 CCDC22O60826 627 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 GPANK1O95872 356 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 RAC2P15153 192 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 ZNF12P17014 697 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 EGR1P18146 543 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 TNFRSF1AP19438 455 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 FXYD6P3P58550 94 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 BTG1P62324 171 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 UBA52P62987 128 aaKnown RBP10.26□□□□□ -0.77
VPS16-208ENST00000487461 ZNF154Q13106 437 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 SEC23BQ15437 767 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 KCNMB1Q16558 191 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 HACD2Q6Y1H2 254 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 DPY19L2P2Q6ZN68 376 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 KLHL36Q8N4N3 616 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 SPICQ8N5J4 248 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 ATG16L2Q8NAA4 619 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 POP5Q969H6 163 aaKnown RBP10.26□□□□□ -0.77
VPS16-208ENST00000487461 C7orf34Q96L11 122 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 COG8Q96MW5 612 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 TSSK2Q96PF2 358 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 OR2V2Q96R30 315 aa10.26□□□□□ -0.77
VPS16-208ENST00000487461 GPX7Q96SL4 187 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms