RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 ZNF761Q86XN6 746 aaPredicted RBP9.57□□□□□ -0.88
CCDC171-208ENST00000486641 GKN2Q86XP6 184 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 ACBD4Q8NC06 268 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 NKD1Q969G9 470 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 MEGF10Q96KG7 1140 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 AQP10Q96PS8 301 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 CDC6Q99741 560 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 CMKLR1Q99788 373 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 RAB33BQ9H082 229 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 PARP11Q9NR21 331 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 PRR13Q9NZ81 148 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 POMT1Q9Y6A1 747 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 A0A1W2PPE2 198 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 GRXCR1A8MXD5 290 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 CT62P0C5K7 136 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 MPZP25189 248 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 HRH1P35367 487 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 CCR2P41597 374 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 SULT1A1P50225 295 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 RPS4XP62701 263 aaKnown RBP9.57□□□□□ -0.88
CCDC171-208ENST00000486641 Q6ZRG5 221 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 VN1R4Q7Z5H5 301 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 STX12Q86Y82 276 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 TMEFF1Q8IYR6 380 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 OR52E1Q8NGJ3 308 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 OR51F2Q8NH61 342 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 MARCH1Q8TCQ1 289 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 CMBLQ96DG6 245 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 CHST5Q9GZS9 411 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 LMAN2LQ9H0V9 348 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 PRDM13Q9H4Q3 707 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 SPACA1Q9HBV2 294 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 PDE7BQ9NP56 450 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 SLC2A4RGQ9NR83 387 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 TAS2R4Q9NYW5 299 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 GTF2A1LQ9UNN4 478 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 CACNA1CQ13936 2221 aa9.57□□□□□ -0.88
CCDC171-208ENST00000486641 HTTP42858 3142 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 A0A087WUJ7 227 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 CXorf65A6NEN9 183 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 ARGFXA6NJG6 315 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 OR52A4PA6NMU1 304 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 LDLRAD4O15165 306 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 IFNA17P01571 189 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 CSTBP04080 98 aaKnown RBP9.56□□□□□ -0.88
CCDC171-208ENST00000486641 CDX1P47902 265 aaPredicted RBP9.56□□□□□ -0.88
CCDC171-208ENST00000486641 PRPS1P60891 318 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 CDK3Q00526 305 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 EGR3Q06889 387 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 DEFB134Q4QY38 66 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 NSUN5P2Q63ZY6 315 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 ERN2Q76MJ5 926 aaKnown RBP9.56□□□□□ -0.88
CCDC171-208ENST00000486641 OR4N2Q8NGD1 307 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 ZCCHC10Q8TBK6 192 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 AQP3Q92482 292 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 GAL3ST3Q96A11 431 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 ELF4Q99607 663 aaPredicted RBP9.56□□□□□ -0.88
CCDC171-208ENST00000486641 KXD1Q9BQD3 176 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 NUDT9Q9BW91 350 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 PARP12Q9H0J9 701 aaKnown RBP9.56□□□□□ -0.88
CCDC171-208ENST00000486641 DCAF16Q9NXF7 216 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 ATXN7L1Q9ULK2 861 aaPredicted RBP9.56□□□□□ -0.88
CCDC171-208ENST00000486641 KCNK6Q9Y257 313 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 URADA6NGE7 173 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 SLC31A2O15432 143 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 MOSPD3O75425 235 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 PNPP00491 289 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 PLGP00747 810 aaPredicted RBP9.56□□□□□ -0.88
CCDC171-208ENST00000486641 IGKV1D-16P01601 117 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 PRNPP04156 253 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 F13BP05160 661 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 RAB6AP20340 208 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 RBP2P50120 134 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 CTXN1P60606 82 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 KIAA0141Q14154 515 aaPredicted RBP9.56□□□□□ -0.88
CCDC171-208ENST00000486641 ZNF260Q3ZCT1 412 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 EIF5AL1Q6IS14 154 aaKnown RBP9.56□□□□□ -0.88
CCDC171-208ENST00000486641 RNF44Q7L0R7 432 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 ADGRE4PQ86SQ3 457 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 C1QL4Q86Z23 238 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 KDF1Q8NAX2 398 aaPredicted RBP9.56□□□□□ -0.88
CCDC171-208ENST00000486641 OR51A2Q8NGJ7 313 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 SMARCD2Q92925 531 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 RSPRY1Q96DX4 576 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 GPX7Q96SL4 187 aaPredicted RBP9.56□□□□□ -0.88
CCDC171-208ENST00000486641 PIGQQ9BRB3 760 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 ELOVL3Q9HB03 270 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 DHDHQ9UQ10 334 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 PDE4DIPQ5VU43 2346 aa9.56□□□□□ -0.88
CCDC171-208ENST00000486641 OR10H2O60403 315 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 PMP2P02689 132 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 ADH1AP07327 375 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 NDUFA6P56556 154 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 TAS2R60P59551 318 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 RAB32Q13637 225 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 SLC9A3R2Q15599 337 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 PHF19Q5T6S3 580 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 UNQ6494/PRO21346Q6UXR6 183 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 ADAMTSL4Q6UY14 1074 aa9.55□□□□□ -0.88
CCDC171-208ENST00000486641 BEND4Q6ZU67 534 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms