RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 LRRTM1Q86UE6 522 aa13.83□□□□□ -0.2
RXRA-203ENST00000484822 MUCL1Q96DR8 90 aa13.83□□□□□ -0.2
RXRA-203ENST00000484822 KCNJ15Q99712 375 aa13.83□□□□□ -0.2
RXRA-203ENST00000484822 FAM103A1Q9BTL3 118 aaKnown RBP13.83□□□□□ -0.2
RXRA-203ENST00000484822 EPHX3Q9H6B9 360 aa13.83□□□□□ -0.2
RXRA-203ENST00000484822 OBP2BQ9NPH6 170 aa13.83□□□□□ -0.2
RXRA-203ENST00000484822 TAAR2Q9P1P5 351 aa13.83□□□□□ -0.2
RXRA-203ENST00000484822 SDCBPO00560 298 aaPredicted RBP13.83□□□□□ -0.2
RXRA-203ENST00000484822 PRAMEF4O60810 478 aa13.83□□□□□ -0.2
RXRA-203ENST00000484822 SLC35D3Q5M8T2 416 aa13.83□□□□□ -0.2
RXRA-203ENST00000484822 SLC48A1Q6P1K1 146 aa13.83□□□□□ -0.2
RXRA-203ENST00000484822 TMEM81Q6P7N7 255 aa13.83□□□□□ -0.2
RXRA-203ENST00000484822 ZNF620Q6ZNG0 422 aa13.83□□□□□ -0.2
RXRA-203ENST00000484822 WFDC5Q8TCV5 224 aa13.83□□□□□ -0.2
RXRA-203ENST00000484822 PPP1R1CQ8WVI7 109 aa13.83□□□□□ -0.2
RXRA-203ENST00000484822 TCTN2Q96GX1 697 aa13.83□□□□□ -0.2
RXRA-203ENST00000484822 OR2A14Q96R47 310 aa13.83□□□□□ -0.2
RXRA-203ENST00000484822 TOLLIPQ9H0E2 274 aa13.83□□□□□ -0.2
RXRA-203ENST00000484822 ZCCHC4Q9H5U6 513 aa13.83□□□□□ -0.2
RXRA-203ENST00000484822 MN1Q10571 1320 aaPredicted RBP13.83□□□□□ -0.2
RXRA-203ENST00000484822 TRAV36DV7A0A075B6V5 113 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 CTNSO60931 367 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 RPL12P30050 165 aaKnown RBP13.82□□□□□ -0.2
RXRA-203ENST00000484822 TEKQ02763 1124 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 RPUSD3Q6P087 351 aaKnown RBP13.82□□□□□ -0.2
RXRA-203ENST00000484822 TWSG1Q9GZX9 223 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 NECAP2Q9NVZ3 263 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 HOXA1P49639 335 aaPredicted RBP13.82□□□□□ -0.2
RXRA-203ENST00000484822 SLC10A1Q14973 349 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 MED25Q71SY5 747 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 ZFP62Q8NB50 900 aaPredicted RBP13.82□□□□□ -0.2
RXRA-203ENST00000484822 OR51A2Q8NGJ7 313 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 PIGQQ9BRB3 760 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 UTP23Q9BRU9 249 aaKnown RBP13.82□□□□□ -0.2
RXRA-203ENST00000484822 SCPEP1Q9HB40 452 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 GNG12Q9UBI6 72 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 POMT2Q9UKY4 750 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 TUBAL3A6NHL2 446 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 SNRPGP15A8MWD9 76 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 ZP3P21754 424 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 CD27P26842 260 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 PARM1Q6UWI2 310 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 OR51H1Q8NH63 302 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 TMED7-TICAM2A0A0A6YYA0 188 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 IFITM5A6NNB3 132 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 HSD17B6O14756 317 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 ANGPTL7O43827 346 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 FABP1P07148 127 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 POU3F2P20265 443 aaPredicted RBP13.82□□□□□ -0.2
RXRA-203ENST00000484822 MAP2K6P52564 334 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 PCBD1P61457 104 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 REEP5Q00765 189 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 IGSF11Q5DX21 431 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 XAF1Q6GPH4 301 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 TCTN3Q6NUS6 607 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 RXFP4Q8TDU9 374 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 NUDCD2Q8WVJ2 157 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 RPUSD4Q96CM3 377 aaKnown RBP13.82□□□□□ -0.2
RXRA-203ENST00000484822 TMEM30AQ9NV96 361 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 TMED7Q9Y3B3 224 aa13.82□□□□□ -0.2
RXRA-203ENST00000484822 TRBV11-1A0A0K0K1C0 115 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 HMGN4O00479 90 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 ARHGAP11BQ3KRB8 267 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 FAHD1Q6P587 224 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 AKR7LQ8NHP1 331 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 PNPP00491 289 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 GABRA2P47869 451 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 SNRPEP62304 92 aaKnown RBP13.81□□□□□ -0.2
RXRA-203ENST00000484822 TPBGQ13641 420 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 ZFPM2Q8WW38 1151 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 PBX4Q9BYU1 374 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 TM7SF3Q9NS93 570 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 HS3ST3A1Q9Y663 406 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 GDF1P27539 372 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 RAB38P57729 211 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 PLAC9Q5JTB6 97 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 OTUD1Q5VV17 481 aaPredicted RBP13.81□□□□□ -0.2
RXRA-203ENST00000484822 IL34Q6ZMJ4 242 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 BATF2Q8N1L9 274 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 SLC6A18Q96N87 628 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 DYNLRB1Q9NP97 96 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 HEYLQ9NQ87 328 aaPredicted RBP13.81□□□□□ -0.2
RXRA-203ENST00000484822 HIST1H1CP16403 213 aaKnown RBP13.81□□□□□ -0.2
RXRA-203ENST00000484822 RPS27P42677 84 aaKnown RBP13.81□□□□□ -0.2
RXRA-203ENST00000484822 RAB1AP62820 205 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 GABREP78334 506 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 LINC00303Q3SY05 128 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 ZNF385BQ569K4 471 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 ABHD17CQ6PCB6 329 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 CMC2Q9NRP2 79 aa13.81□□□□□ -0.2
RXRA-203ENST00000484822 COA3Q9Y2R0 106 aaPredicted RBP13.81□□□□□ -0.2
RXRA-203ENST00000484822 RFPL4AA6NLU0 287 aa13.8□□□□□ -0.2
RXRA-203ENST00000484822 RFPL4AL1F8VTS6 287 aa13.8□□□□□ -0.2
RXRA-203ENST00000484822 SLC25A35Q3KQZ1 300 aa13.8□□□□□ -0.2
RXRA-203ENST00000484822 OR5M1Q8NGP8 315 aa13.8□□□□□ -0.2
RXRA-203ENST00000484822 OR6K3Q8NGY3 331 aa13.8□□□□□ -0.2
RXRA-203ENST00000484822 INTS12Q96CB8 462 aaKnown RBP13.8□□□□□ -0.2
RXRA-203ENST00000484822 AKR1E2Q96JD6 320 aa13.8□□□□□ -0.2
RXRA-203ENST00000484822 ECI1P42126 302 aa13.8□□□□□ -0.2
RXRA-203ENST00000484822 DUSP5Q16690 384 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms