RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 OR2H1Q9GZK4 316 aa8.59□□□□□ -1.03
CPSF4-213ENST00000484112 RAB1BQ9H0U4 201 aa8.59□□□□□ -1.03
CPSF4-213ENST00000484112 PLK3Q9H4B4 646 aa8.59□□□□□ -1.03
CPSF4-213ENST00000484112 EGLN3Q9H6Z9 239 aa8.59□□□□□ -1.03
CPSF4-213ENST00000484112 CDH20Q9HBT6 801 aa8.59□□□□□ -1.03
CPSF4-213ENST00000484112 METRNQ9UJH8 293 aa8.59□□□□□ -1.03
CPSF4-213ENST00000484112 B9D1Q9UPM9 204 aa8.59□□□□□ -1.03
CPSF4-213ENST00000484112 RRP15Q9Y3B9 282 aaKnown RBP8.59□□□□□ -1.03
CPSF4-213ENST00000484112 CMAHPQ9Y471 501 aa8.59□□□□□ -1.03
CPSF4-213ENST00000484112 IGLV1-36A0A0B4J1U3 117 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 H3BSA7 217 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 H7C1C5 153 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 HMGN1P05114 100 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 ERCC1P07992 297 aaPredicted RBP8.58□□□□□ -1.04
CPSF4-213ENST00000484112 GAAP10253 952 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 DAOP14920 347 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 ZNF3P17036 446 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 STOMP27105 288 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 GRK5P34947 590 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 PPOXP50336 477 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 GDI2P50395 445 aaKnown RBP8.58□□□□□ -1.04
CPSF4-213ENST00000484112 CHN2P52757 468 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 SLC25A1P53007 311 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 SELENOVP59797 346 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 LCN6P62502 163 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 PSG4Q00888 419 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 PPP1R8Q12972 351 aaKnown RBP8.58□□□□□ -1.04
CPSF4-213ENST00000484112 SNTB2Q13425 540 aaKnown RBP8.58□□□□□ -1.04
CPSF4-213ENST00000484112 CCNIQ14094 377 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 ENDOGQ14249 297 aaKnown RBP8.58□□□□□ -1.04
CPSF4-213ENST00000484112 ADIPOQQ15848 244 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 MOGQ16653 247 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 CLEC12AQ5QGZ9 265 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 SLC27A4Q6P1M0 643 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 MYPOPQ86VE0 399 aaPredicted RBP8.58□□□□□ -1.04
CPSF4-213ENST00000484112 OR6V1Q8N148 313 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 ZCCHC24Q8N2G6 241 aaKnown RBP8.58□□□□□ -1.04
CPSF4-213ENST00000484112 LINC01356Q8N9X3 169 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 NPEPL1Q8NDH3 523 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 GJC3Q8NFK1 279 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 OR52E2Q8NGJ4 325 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 OR4K13Q8NH42 304 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 FGFBP3Q8TAT2 258 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 MRPL24Q96A35 216 aaKnown RBP8.58□□□□□ -1.04
CPSF4-213ENST00000484112 MS4A3Q96HJ5 214 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 COG8Q96MW5 612 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 DCLRE1CQ96SD1 692 aaKnown RBP8.58□□□□□ -1.04
CPSF4-213ENST00000484112 DDOQ99489 341 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 NIPSNAP1Q9BPW8 284 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 ZNF416Q9BWM5 594 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 NTN4Q9HB63 628 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 CMC2Q9NRP2 79 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 EIF3KQ9UBQ5 218 aaKnown RBP8.58□□□□□ -1.04
CPSF4-213ENST00000484112 REV1Q9UBZ9 1251 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 GPR160Q9UJ42 338 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 COA3Q9Y2R0 106 aaPredicted RBP8.58□□□□□ -1.04
CPSF4-213ENST00000484112 PLCE1Q9P212 2302 aa8.58□□□□□ -1.04
CPSF4-213ENST00000484112 SVEP1Q4LDE5 3571 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 OR6C68A6NDL8 312 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 RIIAD1A6NNX1 92 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 G3V2T6 193 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 H3BN98 237 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 TIPRLO75663 272 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 RGS9O75916 674 aaPredicted RBP8.57□□□□□ -1.04
CPSF4-213ENST00000484112 VENTXO95231 258 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 PATE4P0C8F1 98 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 PAICSP22234 425 aaKnown RBP8.57□□□□□ -1.04
CPSF4-213ENST00000484112 THBS4P35443 961 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 UCP2P55851 309 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 ESRRGP62508 458 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 ACTG1P63261 375 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 HIST1H3AP68431 136 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 ECH1Q13011 328 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 TRIP10Q15642 601 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 ZNF362Q5T0B9 420 aaPredicted RBP8.57□□□□□ -1.04
CPSF4-213ENST00000484112 HIST2H3PS2Q5TEC6 136 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 FAHD1Q6P587 224 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 HIST2H3AQ71DI3 136 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 TMEM179BQ7Z7N9 219 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 ZDHHC13Q8IUH4 622 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 ATG16L2Q8NAA4 619 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 CPEB3Q8NE35 698 aaKnown RBP8.57□□□□□ -1.04
CPSF4-213ENST00000484112 SDR9C7Q8NEX9 313 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 SLC26A10Q8NG04 563 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 OR8D4Q8NGM9 314 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 CENPNQ96H22 339 aaPredicted RBP8.57□□□□□ -1.04
CPSF4-213ENST00000484112 POM121L2Q96KW2 1035 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 RBM4Q9BWF3 364 aaKnown RBP8.57□□□□□ -1.04
CPSF4-213ENST00000484112 PRRG3Q9BZD7 231 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 HDHD2Q9H0R4 259 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 GABARAPL1Q9H0R8 117 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 MS4A5Q9H3V2 200 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 METTL17Q9H7H0 456 aaPredicted RBP8.57□□□□□ -1.04
CPSF4-213ENST00000484112 ELOVL3Q9HB03 270 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 RPRD1BQ9NQG5 326 aaKnown RBP8.57□□□□□ -1.04
CPSF4-213ENST00000484112 PAPOLBQ9NRJ5 636 aaKnown RBP8.57□□□□□ -1.04
CPSF4-213ENST00000484112 KIF17Q9P2E2 1029 aa8.57□□□□□ -1.04
CPSF4-213ENST00000484112 CGGBP1Q9UFW8 167 aaPredicted RBP8.57□□□□□ -1.04
CPSF4-213ENST00000484112 ARFGEF3Q5TH69 2177 aa8.56□□□□□ -1.04
CPSF4-213ENST00000484112 OR6C6A6NF89 314 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms