RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 OR1F12Q8NHA8 337 aa16.96■□□□□ 0.31
MSH5-215ENST00000482280 CCL17Q92583 94 aa16.96■□□□□ 0.31
MSH5-215ENST00000482280 RAB39BQ96DA2 213 aa16.96■□□□□ 0.31
MSH5-215ENST00000482280 SOX7Q9BT81 388 aa16.96■□□□□ 0.31
MSH5-215ENST00000482280 MUC13Q9H3R2 512 aa16.96■□□□□ 0.31
MSH5-215ENST00000482280 TREM2Q9NZC2 230 aa16.96■□□□□ 0.31
MSH5-215ENST00000482280 ACTR3BQ9P1U1 418 aa16.96■□□□□ 0.31
MSH5-215ENST00000482280 OR6C6A6NF89 314 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 TNFRSF11BO00300 401 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 IDH3BO43837 385 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 RP2O75695 350 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 MPZL1O95297 269 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 IGHV1-46P01743 117 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 SCG5P05408 212 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 CDKN2AP42771 156 aaKnown RBP16.95■□□□□ 0.3
MSH5-215ENST00000482280 RGS6P49758 472 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 TSPAN31Q12999 210 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 SLC36A3Q495N2 470 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 SHQ1Q6PI26 577 aaKnown RBP16.95■□□□□ 0.3
MSH5-215ENST00000482280 PTCHD4Q6ZW05 846 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 DHFR2Q86XF0 187 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 OR2AJ1Q8NGZ0 328 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 OR51F2Q8NH61 342 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 SPATA3Q8NHX4 192 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 SAMD8Q96LT4 415 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 LRGUKQ96M69 825 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 DCLRE1CQ96SD1 692 aaKnown RBP16.95■□□□□ 0.3
MSH5-215ENST00000482280 FUZQ9BT04 418 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 LPAR2Q9HBW0 351 aa16.95■□□□□ 0.3
MSH5-215ENST00000482280 SRA1Q9HD15 236 aaKnown RBP16.95■□□□□ 0.3
MSH5-215ENST00000482280 ARPC3O15145 178 aa16.94■□□□□ 0.3
MSH5-215ENST00000482280 PHF1O43189 567 aaPredicted RBP16.94■□□□□ 0.3
MSH5-215ENST00000482280 FAM107AO95990 144 aa16.94■□□□□ 0.3
MSH5-215ENST00000482280 MSMBP08118 114 aa16.94■□□□□ 0.3
MSH5-215ENST00000482280 CALB2P22676 271 aa16.94■□□□□ 0.3
MSH5-215ENST00000482280 THBS2P35442 1172 aa16.94■□□□□ 0.3
MSH5-215ENST00000482280 MMP15P51511 669 aa16.94■□□□□ 0.3
MSH5-215ENST00000482280 FXYD6P3P58550 94 aa16.94■□□□□ 0.3
MSH5-215ENST00000482280 TNFAIP6P98066 277 aaPredicted RBP16.94■□□□□ 0.3
MSH5-215ENST00000482280 SCGB2A2Q13296 93 aa16.94■□□□□ 0.3
MSH5-215ENST00000482280 FAM98BQ52LJ0 330 aaKnown RBP16.94■□□□□ 0.3
MSH5-215ENST00000482280 AVPI1Q5T686 147 aa16.94■□□□□ 0.3
MSH5-215ENST00000482280 RINLQ6ZS11 566 aa16.94■□□□□ 0.3
MSH5-215ENST00000482280 FITM2Q8N6M3 262 aa16.94■□□□□ 0.3
MSH5-215ENST00000482280 OR4K13Q8NH42 304 aa16.94■□□□□ 0.3
MSH5-215ENST00000482280 GTF3AQ92664 365 aaKnown RBP16.94■□□□□ 0.3
MSH5-215ENST00000482280 NMNAT3Q96T66 252 aa16.94■□□□□ 0.3
MSH5-215ENST00000482280 GPA33Q99795 319 aa16.94■□□□□ 0.3
MSH5-215ENST00000482280 HDHD2Q9H0R4 259 aa16.94■□□□□ 0.3
MSH5-215ENST00000482280 RPRD1BQ9NQG5 326 aaKnown RBP16.94■□□□□ 0.3
MSH5-215ENST00000482280 ATPIF1Q9UII2 106 aa16.94■□□□□ 0.3
MSH5-215ENST00000482280 RTTNQ86VV8 2226 aa16.93■□□□□ 0.3
MSH5-215ENST00000482280 ISPDA4D126 451 aa16.93■□□□□ 0.3
MSH5-215ENST00000482280 ZSCAN5BA6NJL1 495 aa16.93■□□□□ 0.3
MSH5-215ENST00000482280 J3QW42 95 aa16.93■□□□□ 0.3
MSH5-215ENST00000482280 SURF4O15260 269 aa16.93■□□□□ 0.3
MSH5-215ENST00000482280 GAAP10253 952 aa16.93■□□□□ 0.3
MSH5-215ENST00000482280 TNFRSF1AP19438 455 aa16.93■□□□□ 0.3
MSH5-215ENST00000482280 KCNMB1Q16558 191 aa16.93■□□□□ 0.3
MSH5-215ENST00000482280 TEX29Q8N6K0 151 aa16.93■□□□□ 0.3
MSH5-215ENST00000482280 TMEM186Q96B77 213 aa16.93■□□□□ 0.3
MSH5-215ENST00000482280 C1orf159Q96HA4 380 aa16.93■□□□□ 0.3
MSH5-215ENST00000482280 TSSK2Q96PF2 358 aa16.93■□□□□ 0.3
MSH5-215ENST00000482280 RACGAP1Q9H0H5 632 aa16.93■□□□□ 0.3
MSH5-215ENST00000482280 MSL2Q9HCI7 577 aa16.93■□□□□ 0.3
MSH5-215ENST00000482280 HIF1ANQ9NWT6 349 aa16.93■□□□□ 0.3
MSH5-215ENST00000482280 B9D1Q9UPM9 204 aa16.93■□□□□ 0.3
MSH5-215ENST00000482280 RER1O15258 196 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 CCNB2O95067 398 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 HIST1H1CP16403 213 aaKnown RBP16.92■□□□□ 0.3
MSH5-215ENST00000482280 GSSP48637 474 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 PSG7Q13046 419 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 CLEC12AQ5QGZ9 265 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 LIPNQ5VXI9 398 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 OTPQ5XKR4 325 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 ACSM5Q6NUN0 579 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 ZNF620Q6ZNG0 422 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 SDR9C7Q8NEX9 313 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 OR2Z1Q8NG97 314 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 OR52E2Q8NGJ4 325 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 PTP4A1Q93096 173 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 CMBLQ96DG6 245 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 GAL3ST1Q99999 423 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 MAGIXQ9H6Y5 334 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 ZNF665Q9H7R5 613 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 REEP1Q9H902 201 aa16.92■□□□□ 0.3
MSH5-215ENST00000482280 PURGQ9UJV8 347 aaKnown RBP16.92■□□□□ 0.3
MSH5-215ENST00000482280 TRAV20A0A0B4J274 112 aa16.91■□□□□ 0.3
MSH5-215ENST00000482280 DYNC1I1O14576 645 aa16.91■□□□□ 0.3
MSH5-215ENST00000482280 ADH4P08319 380 aa16.91■□□□□ 0.3
MSH5-215ENST00000482280 ZNF823P16415 610 aa16.91■□□□□ 0.3
MSH5-215ENST00000482280 MEP1BQ16820 701 aa16.91■□□□□ 0.3
MSH5-215ENST00000482280 SLC35F1Q5T1Q4 408 aa16.91■□□□□ 0.3
MSH5-215ENST00000482280 PGBD2Q6P3X8 592 aa16.91■□□□□ 0.3
MSH5-215ENST00000482280 OR6V1Q8N148 313 aa16.91■□□□□ 0.3
MSH5-215ENST00000482280 SLC7A6Q92536 515 aa16.91■□□□□ 0.3
MSH5-215ENST00000482280 APOBEC3DQ96AK3 386 aaPredicted RBP16.91■□□□□ 0.3
MSH5-215ENST00000482280 PITX2Q99697 317 aa16.91■□□□□ 0.3
MSH5-215ENST00000482280 COQ7Q99807 217 aa16.91■□□□□ 0.3
MSH5-215ENST00000482280 TRIM15Q9C019 465 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms