RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 WARSP23381 471 aaKnown RBP2.72□□□□□ -1.97
SMC6-208ENST00000481708 MPGP29372 298 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 HMGCLP35914 325 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 AMTP48728 403 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 ZNF121P58317 390 aaPredicted RBP2.72□□□□□ -1.97
SMC6-208ENST00000481708 ERVS71-1P61550 626 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 PDGFRLQ15198 375 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 C5orf64Q2M2E5 130 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 FAM153CQ494X1 144 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 SLC22A6Q4U2R8 563 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 ATP1A1-AS1Q5TC04 95 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 FAM151BQ6UXP7 276 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 FCRLAQ7L513 359 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 VPS36Q86VN1 386 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 KLHDC8BQ8IXV7 354 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 METTL4Q8N3J2 472 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 GVQW1Q8N7I0 195 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 ZFP41Q8N8Y5 198 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 PPFIBP2Q8ND30 876 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 ADAMTS16Q8TE57 1224 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 ECHDC3Q96DC8 303 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 ZBED6CLQ96FA7 236 aaPredicted RBP2.72□□□□□ -1.97
SMC6-208ENST00000481708 CMTM7Q96FZ5 175 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 SORT1Q99523 831 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 ACTR3CQ9C0K3 210 aaPredicted RBP2.72□□□□□ -1.97
SMC6-208ENST00000481708 PLEKHA3Q9HB20 300 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 ESM1Q9NQ30 184 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 Q9UF83 564 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 CEP250Q9BV73 2442 aa2.72□□□□□ -1.97
SMC6-208ENST00000481708 IGKV1D-8A0A087WSZ0 117 aa2.71□□□□□ -1.97
SMC6-208ENST00000481708 IGHV1OR15-9A0A0B4J2B8 117 aa2.71□□□□□ -1.97
SMC6-208ENST00000481708 NPIPB9F8W1W9 429 aa2.71□□□□□ -1.97
SMC6-208ENST00000481708 TNFRSF13BO14836 293 aaPredicted RBP2.71□□□□□ -1.97
SMC6-208ENST00000481708 FARS2O95363 451 aaKnown RBP2.71□□□□□ -1.97
SMC6-208ENST00000481708 PGAM1P18669 254 aa2.71□□□□□ -1.97
SMC6-208ENST00000481708 C21orf33P30042 268 aaPredicted RBP2.71□□□□□ -1.97
SMC6-208ENST00000481708 RPS13P62277 151 aaKnown RBP2.71□□□□□ -1.97
SMC6-208ENST00000481708 CALCOCO2Q13137 446 aa2.71□□□□□ -1.97
SMC6-208ENST00000481708 FAM106AQ4KMX7 169 aa2.71□□□□□ -1.97
SMC6-208ENST00000481708 STUMQ69YW2 141 aa2.71□□□□□ -1.97
SMC6-208ENST00000481708 IQCKQ8N0W5 287 aa2.71□□□□□ -1.97
SMC6-208ENST00000481708 ABHD12Q8N2K0 398 aa2.71□□□□□ -1.97
SMC6-208ENST00000481708 BPIFB2Q8N4F0 458 aa2.71□□□□□ -1.97
SMC6-208ENST00000481708 MREGQ8N565 214 aa2.71□□□□□ -1.97
SMC6-208ENST00000481708 IQCF1Q8N6M8 205 aa2.71□□□□□ -1.97
SMC6-208ENST00000481708 INO80EQ8NBZ0 244 aaPredicted RBP2.71□□□□□ -1.97
SMC6-208ENST00000481708 ICA1LQ8NDH6 482 aa2.71□□□□□ -1.97
SMC6-208ENST00000481708 UFD1Q92890 307 aa2.71□□□□□ -1.97
SMC6-208ENST00000481708 C3orf18Q9UK00 162 aa2.71□□□□□ -1.97
SMC6-208ENST00000481708 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.71□□□□□ -1.97
SMC6-208ENST00000481708 CSMD1Q96PZ7 3565 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 NCOR2Q9Y618 2525 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 PSMB11A5LHX3 300 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 GAGE12JA6NER3 117 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 SIRPB1O00241 398 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 SYNGR3O43761 229 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 FADS2O95864 444 aaKnown RBP2.71□□□□□ -1.98
SMC6-208ENST00000481708 IGHV3-9P01782 118 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 HLA-DRAP01903 254 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 CTSLP07711 333 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 COX5BP10606 129 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 FOLR1P15328 257 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 ATP5A1P25705 553 aaKnown RBP2.71□□□□□ -1.98
SMC6-208ENST00000481708 HMOX2P30519 316 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 GSK3BP49841 420 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 INCA1Q0VD86 236 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 EPGNQ6UW88 154 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 CASP12Q6UXS9 341 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 FRRS1Q6ZNA5 592 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 SLC25A38Q96DW6 304 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 CHMP6Q96FZ7 201 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 ZNF251Q9BRH9 671 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 NICN1Q9BSH3 213 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 PATZ1Q9HBE1 687 aaKnown RBP2.71□□□□□ -1.98
SMC6-208ENST00000481708 PAK1IP1Q9NWT1 392 aaPredicted RBP2.71□□□□□ -1.98
SMC6-208ENST00000481708 OARD1Q9Y530 152 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 V9GYY9 64 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 SAGE2PA6NJ88 616 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 C15orf62A8K5M9 175 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 ERI2A8K979 691 aaKnown RBP2.71□□□□□ -1.98
SMC6-208ENST00000481708 ZNF705EA8MWA4 302 aaPredicted RBP2.71□□□□□ -1.98
SMC6-208ENST00000481708 K7ENP7 123 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 ATP6V0E1O15342 81 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 PLEKHA8P1O95397 391 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 ABOP16442 354 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 LEPP41159 167 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 ACTR1BP42025 376 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 CAPZBP47756 277 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 ZFP36L2P47974 494 aaKnown RBP2.71□□□□□ -1.98
SMC6-208ENST00000481708 MLLT10P55197 1068 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 MAPRE2Q15555 327 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 CCDC6Q16204 474 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 ZNF658BQ4V348 819 aaPredicted RBP2.71□□□□□ -1.98
SMC6-208ENST00000481708 PRMT9Q6P2P2 845 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 IGFL2Q6UWQ7 119 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 KMT5CQ86Y97 462 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 PRELID2Q8N945 189 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 ITFG1Q8TB96 612 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 C9orf72Q96LT7 481 aa2.71□□□□□ -1.98
SMC6-208ENST00000481708 KIR2DL4Q99706 377 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms