RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 MRM2Q9UI43 246 aaKnown RBP8.91□□□□□ -0.98
USP39-215ENST00000481409 GNG8Q9UK08 70 aa8.91□□□□□ -0.98
USP39-215ENST00000481409 IKZF2Q9UKS7 526 aa8.91□□□□□ -0.98
USP39-215ENST00000481409 AMDHD2Q9Y303 409 aa8.91□□□□□ -0.98
USP39-215ENST00000481409 PKD1L2Q7Z442 2459 aa8.91□□□□□ -0.98
USP39-215ENST00000481409 ATMQ13315 3056 aa8.91□□□□□ -0.98
USP39-215ENST00000481409 TLN1Q9Y490 2541 aaKnown RBP8.9□□□□□ -0.98
USP39-215ENST00000481409 TMEM212A6NML5 194 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 B8ZZF3 427 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 J3QW42 95 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 CCL21O00585 134 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 ZNHIT1O43257 154 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 NOL3O60936 208 aaKnown RBP8.9□□□□□ -0.98
USP39-215ENST00000481409 INMTO95050 263 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 GPANK1O95872 356 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 IGHV3-9P01782 118 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 ADRA2AP08913 450 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 MMP7P09237 267 aaPredicted RBP8.9□□□□□ -0.98
USP39-215ENST00000481409 PPP3CBP16298 524 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 EDNRAP25101 427 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 HSD11B1P28845 292 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 CHRNB4P30926 498 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 GABRA5P31644 462 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 OTX1P32242 354 aaPredicted RBP8.9□□□□□ -0.98
USP39-215ENST00000481409 RGS6P49758 472 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 TMBIM6P55061 237 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 GP2P55259 537 aaKnown RBP8.9□□□□□ -0.98
USP39-215ENST00000481409 OR12D2P58182 307 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 UBE2NP61088 152 aaKnown RBP8.9□□□□□ -0.98
USP39-215ENST00000481409 PLP2Q04941 152 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 TAF13Q15543 124 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 GABRA6Q16445 453 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 TBRG1Q3YBR2 411 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 FBXL19-AS1Q494R0 122 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 TIMM23BQ5SRD1 257 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 LIPNQ5VXI9 398 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 DMKNQ6E0U4 476 aaPredicted RBP8.9□□□□□ -0.98
USP39-215ENST00000481409 SSX6Q7RTT6 188 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 ANKRD13BQ86YJ7 626 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 SKA3Q8IX90 412 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 LRRC18Q8N456 261 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 CCDC54Q8NEL0 328 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 STEAP2Q8NFT2 490 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 GATAD2BQ8WXI9 593 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 PHYHIPQ92561 330 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 SMIM19Q96E16 107 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 FBXO17Q96EF6 278 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 MAP6Q96JE9 813 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 FOXN4Q96NZ1 517 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 OPALINQ96PE5 141 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 OR5M11Q96RB7 305 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 KCNJ15Q99712 375 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 ELOVL3Q9HB03 270 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 EMC7Q9NPA0 242 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 PNRC2Q9NPJ4 139 aaKnown RBP8.9□□□□□ -0.98
USP39-215ENST00000481409 NDUFB11Q9NX14 153 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 PLEK2Q9NYT0 353 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 ZNF391Q9UJN7 358 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 OSGIN2Q9Y236 505 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 LRP12Q9Y561 859 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 R4GMQ9 66 aa8.9□□□□□ -0.98
USP39-215ENST00000481409 TPRP12270 2363 aaKnown RBP8.9□□□□□ -0.99
USP39-215ENST00000481409 IQCMA0A1B0GVH7 501 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 A6NHS1 94 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 RER1O15258 196 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 SYNGR3O43761 229 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 DOK2O60496 412 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 SERPINA3P01011 423 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 HLA-DPB1P04440 258 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 HSMCR30P0CW71 290 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 ZNF12P17014 697 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 ZNF32P17041 273 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 HCCSP53701 268 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 PSMA6P60900 246 aaKnown RBP8.89□□□□□ -0.99
USP39-215ENST00000481409 ALKBH1Q13686 389 aaKnown RBP8.89□□□□□ -0.99
USP39-215ENST00000481409 CDK5R1Q15078 307 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 GSG1Q2KHT4 349 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 TP53I3Q53FA7 332 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 C4orf17Q53FE4 359 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 CCDC92Q53HC0 331 aaPredicted RBP8.89□□□□□ -0.99
USP39-215ENST00000481409 DRAM2Q6UX65 266 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 PAMR1Q6UXH9 720 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 CFAP77Q6ZQR2 320 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 BHLHA15Q7RTS1 189 aaPredicted RBP8.89□□□□□ -0.99
USP39-215ENST00000481409 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.89□□□□□ -0.99
USP39-215ENST00000481409 KLBQ86Z14 1044 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 LINC00346Q8IVM7 164 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 PHC2Q8IXK0 858 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 C1orf174Q8IYL3 243 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 RPRMLQ8N4K4 120 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 IL17RDQ8NFM7 739 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 OR1J2Q8NGS2 313 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 OR1F12Q8NHA8 337 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 RAB2BQ8WUD1 216 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 DGCR14Q96DF8 476 aaKnown RBP8.89□□□□□ -0.99
USP39-215ENST00000481409 YIPF6Q96EC8 236 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 SH3GL3Q99963 347 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 OR2H1Q9GZK4 316 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 COMMD4Q9H0A8 199 aa8.89□□□□□ -0.99
USP39-215ENST00000481409 RNF121Q9H920 327 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms