RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 ASH2LQ9UBL3 628 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 HHLA2Q9UM44 414 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 RABL2BQ9UNT1 228 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 FOXJ3Q9UPW0 622 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 ALPK2Q86TB3 2170 aa9.73□□□□□ -0.85
VTI1A-204ENST00000480057 RPL36A-HNRNPH2H7BZ11 118 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 AQP7O14520 342 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 TFECO14948 347 aaPredicted RBP9.72□□□□□ -0.85
VTI1A-204ENST00000480057 KLK10O43240 276 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 NCR1O76036 304 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 ZNF24P17028 368 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 EIF2S3P41091 472 aaKnown RBP9.72□□□□□ -0.85
VTI1A-204ENST00000480057 EVX1P49640 407 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 ENDOGQ14249 297 aaKnown RBP9.72□□□□□ -0.85
VTI1A-204ENST00000480057 SGCAQ16586 387 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 BCL2L15Q5TBC7 163 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 CORO6Q6QEF8 472 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 BTLAQ7Z6A9 289 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 LRRC28Q86X40 367 aaPredicted RBP9.72□□□□□ -0.85
VTI1A-204ENST00000480057 ELMOD2Q8IZ81 293 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 CCDC54Q8NEL0 328 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 ABHD3Q8WU67 409 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 WDYHV1Q96HA8 205 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 DIRAS2Q96HU8 199 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 ZNF416Q9BWM5 594 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 RBM24Q9BX46 236 aaKnown RBP9.72□□□□□ -0.85
VTI1A-204ENST00000480057 SRRQ9GZT4 340 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 PRDM14Q9GZV8 571 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 SLCO5A1Q9H2Y9 848 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 TMEM38BQ9NVV0 291 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 COMMD3Q9UBI1 195 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 NUFIP1Q9UHK0 495 aaKnown RBP9.72□□□□□ -0.85
VTI1A-204ENST00000480057 KLK13Q9UKR3 277 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 DHDHQ9UQ10 334 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 NOSIPQ9Y314 301 aaKnown RBP9.72□□□□□ -0.85
VTI1A-204ENST00000480057 EMC9Q9Y3B6 208 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 V9GY05 133 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 GVINP1Q7Z2Y8 2422 aa9.72□□□□□ -0.85
VTI1A-204ENST00000480057 FAM186AA6NE01 2351 aa9.71□□□□□ -0.85
VTI1A-204ENST00000480057 A0A1B0GTH9 108 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 MEGF11A6BM72 1044 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 FABP12A6NFH5 140 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 IFITM5A6NNB3 132 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 AIPO00170 330 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 MRPL33O75394 65 aaKnown RBP9.71□□□□□ -0.86
VTI1A-204ENST00000480057 CALCBP10092 127 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 HSD11B1P28845 292 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 RANBP1P43487 201 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 OR10A3P58181 314 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 PCBD1P61457 104 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 SRYQ05066 204 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 SCRN3Q0VDG4 424 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 FOXC1Q12948 553 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 ECH1Q13011 328 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 ZNF169Q14929 603 aaPredicted RBP9.71□□□□□ -0.86
VTI1A-204ENST00000480057 TAF13Q15543 124 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 RNFT1Q5M7Z0 435 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 OTPQ5XKR4 325 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 RPUSD3Q6P087 351 aaKnown RBP9.71□□□□□ -0.86
VTI1A-204ENST00000480057 BAIAP2L2Q6UXY1 529 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 STAC2Q6ZMT1 411 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 Q6ZNX1 250 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 SPATC1Q76KD6 591 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 ZNF627Q7L945 461 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 LRRTM1Q86UE6 522 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 LYSMD2Q8IV50 215 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 SETD6Q8TBK2 473 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 TSEN15Q8WW01 171 aaKnown RBP9.71□□□□□ -0.86
VTI1A-204ENST00000480057 TMEM106AQ96A25 262 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 KCNJ15Q99712 375 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 PRRG4Q9BZD6 226 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 PBOV1Q9GZY1 135 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 HDHD2Q9H0R4 259 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 DEFB127Q9H1M4 99 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 EXO5Q9H790 373 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 GPR35Q9HC97 309 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 GLRX2Q9NS18 164 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 CYSLTR2Q9NS75 346 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 SPRR3Q9UBC9 169 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 CKLFQ9UBR5 152 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 DKK4Q9UBT3 224 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 DAPK2Q9UIK4 370 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 FBXL3Q9UKT7 428 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 SPATA2Q9UM82 520 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 WASF3Q9UPY6 502 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 SLC22A13Q9Y226 551 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 LIPGQ9Y5X9 500 aa9.71□□□□□ -0.86
VTI1A-204ENST00000480057 CNOT1A5YKK6 2376 aaKnown RBP9.7□□□□□ -0.86
VTI1A-204ENST00000480057 RIF1Q5UIP0 2472 aaKnown RBP9.7□□□□□ -0.86
VTI1A-204ENST00000480057 LOC107986453A0A1B0GWG9 222 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 A0A1W2PPK0 400 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 DCDC2BA2VCK2 349 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 SMIM30A4D0T7 59 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 RER1O15258 196 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 TBX1O43435 398 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 HPGDSO60760 199 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 TPPPO94811 219 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 APOA1P02647 267 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 ITGB2P05107 769 aa9.7□□□□□ -0.86
VTI1A-204ENST00000480057 YES1P07947 543 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms