RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 SEH1LQ96EE3 360 aa2.97□□□□□ -1.93
CCDC58-204ENST00000479414 MICU1Q9BPX6 476 aa2.97□□□□□ -1.93
CCDC58-204ENST00000479414 FAM192AQ9GZU8 254 aa2.97□□□□□ -1.93
CCDC58-204ENST00000479414 HMG20AQ9NP66 347 aa2.97□□□□□ -1.93
CCDC58-204ENST00000479414 SAMSN1Q9NSI8 373 aaKnown RBP2.97□□□□□ -1.93
CCDC58-204ENST00000479414 SLC17A4Q9Y2C5 497 aa2.97□□□□□ -1.93
CCDC58-204ENST00000479414 IGLV1-50A0A075B6I6 118 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 TMEM223A0PJW6 202 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 TEX46H3BTG2 121 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 H7C417 338 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 SCAMP2O15127 329 aaKnown RBP2.96□□□□□ -1.94
CCDC58-204ENST00000479414 RDH16O75452 317 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 CCNKO75909 580 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 CCNB1P14635 433 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 TCN2P20062 427 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 F2RP25116 425 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 OR1E1P30953 314 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 RRM2P31350 389 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 PRR3P79522 188 aaKnown RBP2.96□□□□□ -1.94
CCDC58-204ENST00000479414 ILKQ13418 452 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 SMUG1Q53HV7 270 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 FBXW9Q5XUX1 488 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 CBLN2Q8IUK8 224 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 CNPY4Q8N129 248 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 METTL13Q8N6R0 699 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 NPWQ8N729 165 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 C11orf72Q8NBR9 251 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 PIFOQ8TCI5 191 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 GALNT14Q96FL9 552 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 PRRC1Q96M27 445 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 PLIN2Q99541 437 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 CTRCQ99895 268 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 RTBDNQ9BSG5 229 aaPredicted RBP2.96□□□□□ -1.94
CCDC58-204ENST00000479414 PARP12Q9H0J9 701 aaKnown RBP2.96□□□□□ -1.94
CCDC58-204ENST00000479414 EDA2RQ9HAV5 297 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 NEK6Q9HC98 313 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 MTCH1Q9NZJ7 389 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 MTFP1Q9UDX5 166 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 NSD2O96028 1365 aa2.96□□□□□ -1.94
CCDC58-204ENST00000479414 SERPINE3A8MV23 424 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 WBP4O75554 376 aaKnown RBP2.95□□□□□ -1.94
CCDC58-204ENST00000479414 FLOT1O75955 427 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 ARG1P05089 322 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 BCKDHBP21953 392 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 NPY1RP25929 384 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 SSTR5P35346 364 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 STXBP1P61764 594 aaKnown RBP2.95□□□□□ -1.94
CCDC58-204ENST00000479414 RPS15P62841 145 aaKnown RBP2.95□□□□□ -1.94
CCDC58-204ENST00000479414 C12orf54Q6X4T0 127 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 UBALD2Q8IYN6 164 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 LYPD1Q8N2G4 141 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 ZNF615Q8N8J6 731 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 OR6N1Q8NGY5 312 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 LYPD6BQ8NI32 183 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 ZNF461Q8TAF7 563 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 CIRBP-AS1Q8TBR5 109 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 ZNF317Q96PQ6 595 aaPredicted RBP2.95□□□□□ -1.94
CCDC58-204ENST00000479414 TMEM165Q9HC07 324 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 AGPAT4Q9NRZ5 378 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 CCDC59Q9P031 241 aaKnown RBP2.95□□□□□ -1.94
CCDC58-204ENST00000479414 CTSFQ9UBX1 484 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 RFNGQ9Y644 331 aa2.95□□□□□ -1.94
CCDC58-204ENST00000479414 IGKV1-8A0A0C4DH67 115 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 LYRM9A8MSI8 78 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 ZNF806P0C7X5 589 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 ATF6P18850 670 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 PPP1CBP62140 327 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 CCNA1P78396 465 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 IRF4Q15306 451 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 ORMDL2Q53FV1 153 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 THEM4Q5T1C6 240 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 METAP1DQ6UB28 335 aaPredicted RBP2.94□□□□□ -1.94
CCDC58-204ENST00000479414 PRSS58Q8IYP2 241 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 BBS5Q8N3I7 341 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 RNF182Q8N6D2 247 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 ZNF721Q8TF20 911 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 NTAN1Q96AB6 310 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 NARS2Q96I59 477 aaKnown RBP2.94□□□□□ -1.94
CCDC58-204ENST00000479414 ZNF488Q96MN9 340 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 TGS1Q96RS0 853 aaKnown RBP2.94□□□□□ -1.94
CCDC58-204ENST00000479414 ZNF382Q96SR6 550 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 TIMM17AQ99595 171 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 ANKRD60Q9BZ19 345 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 OR52D1Q9H346 318 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 GEMIN7Q9H840 131 aaKnown RBP2.94□□□□□ -1.94
CCDC58-204ENST00000479414 DCAF16Q9NXF7 216 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 TMEM14AQ9Y6G1 99 aa2.94□□□□□ -1.94
CCDC58-204ENST00000479414 INSRP06213 1382 aa2.93□□□□□ -1.94
CCDC58-204ENST00000479414 H7C1H1 209 aa2.93□□□□□ -1.94
CCDC58-204ENST00000479414 NDUFAB1O14561 156 aa2.93□□□□□ -1.94
CCDC58-204ENST00000479414 SLC9A3R1O14745 358 aaPredicted RBP2.93□□□□□ -1.94
CCDC58-204ENST00000479414 NVLO15381 856 aaKnown RBP2.93□□□□□ -1.94
CCDC58-204ENST00000479414 CDH16O75309 829 aa2.93□□□□□ -1.94
CCDC58-204ENST00000479414 AQP8O94778 261 aa2.93□□□□□ -1.94
CCDC58-204ENST00000479414 MPZL1O95297 269 aa2.93□□□□□ -1.94
CCDC58-204ENST00000479414 KRT14P02533 472 aa2.93□□□□□ -1.94
CCDC58-204ENST00000479414 CSNK2A2P19784 350 aaPredicted RBP2.93□□□□□ -1.94
CCDC58-204ENST00000479414 U2AF2P26368 475 aaKnown RBP eCLIP2.93□□□□□ -1.941e-7■□□□□ 10.1
CCDC58-204ENST00000479414 GTF2E2P29084 291 aaKnown RBP2.93□□□□□ -1.94
CCDC58-204ENST00000479414 CX3CR1P49238 355 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms