RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 LIMS4P0CW20 117 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 DOC2BQ14184 412 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 LTC4SQ16873 150 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 AKR1C8PQ5T2L2 129 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 PWWP2BQ6NUJ5 590 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 COMMD7Q86VX2 200 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 NAXDQ8IW45 347 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 TAAR8Q969N4 342 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 C1QTNF6Q9BXI9 259 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 GPR173Q9NS66 373 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 CLEC1BQ9P126 229 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 SPTAN1Q13813 2472 aaKnown RBP12.86□□□□□ -0.35
NPHP4-208ENST00000478423 A0A096LPE4 126 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 A0A1W2PPZ6 126 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 SLC22A23A1A5C7 686 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 ALG1L2C9J202 215 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 TAS2R20P59543 309 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 FBXW12Q6X9E4 464 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 CARFQ8N187 725 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 BATF2Q8N1L9 274 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 OR10K1Q8NGX5 313 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 RNF170Q96K19 258 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 DERL3Q96Q80 235 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 ZPBPQ9BS86 351 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 PTTG3PQ9NZH4 202 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 TIMM10BQ9Y5J6 103 aa12.86□□□□□ -0.35
NPHP4-208ENST00000478423 CCDC187A0A096LP49 1063 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 STAC2Q6ZMT1 411 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 RNF128Q8TEB7 428 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 SLC7A6Q92536 515 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 TCEAL3Q969E4 200 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 FCRL1Q96LA6 429 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 P4HTMQ9NXG6 502 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 MYOTQ9UBF9 498 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 ABCA7Q8IZY2 2146 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 MIA3Q5JRA6 1907 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 PPIAP62937 165 aaKnown RBP12.85□□□□□ -0.35
NPHP4-208ENST00000478423 PSG6Q00889 435 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 MYBPHQ13203 477 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 TRA2AQ13595 282 aaKnown RBP eCLIP12.85□□□□□ -0.35
NPHP4-208ENST00000478423 POU4F3Q15319 338 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 RHBDD2Q6NTF9 364 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 MOB1AQ9H8S9 216 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 FBXL4Q9UKA2 621 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 PMP2P02689 132 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 RBP2P50120 134 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 ASAH1Q13510 395 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 EBPQ15125 230 aaKnown RBP12.85□□□□□ -0.35
NPHP4-208ENST00000478423 C20orf85Q9H1P6 137 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 CRLF2Q9HC73 371 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 GNG12Q9UBI6 72 aa12.85□□□□□ -0.35
NPHP4-208ENST00000478423 A0A087WZY1 265 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 TPT1P13693 172 aaKnown RBP12.84□□□□□ -0.35
NPHP4-208ENST00000478423 IDH3GP51553 393 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-208ENST00000478423 UBE2IP63279 158 aaKnown RBP12.84□□□□□ -0.35
NPHP4-208ENST00000478423 BCL2A1Q16548 175 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 DMRTC1Q5HYR2 192 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 CMTM4Q8IZR5 234 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 OR8D4Q8NGM9 314 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 ARL11Q969Q4 196 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 ALKBH3Q96Q83 286 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-208ENST00000478423 TAAR9Q96RI9 348 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 PBDC1Q9BVG4 233 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 JAM3Q9BX67 310 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 OCEL1Q9H607 264 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 R4GN57 208 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 TNFSF11O14788 317 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 FFAR1O14842 300 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 IGHV4-34P06331 123 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 POU3F3P20264 500 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-208ENST00000478423 PCK2Q16822 640 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 COMTD1Q86VU5 262 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 ROBO4Q8WZ75 1007 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 NGBQ9NPG2 151 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 GDF2Q9UK05 429 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-208ENST00000478423 R4GMQ9 66 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 ZFC3H1O60293 1989 aaKnown RBP12.84□□□□□ -0.35
NPHP4-208ENST00000478423 PRICKLE3O43900 615 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-208ENST00000478423 NPY4RP50391 375 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 ARSJQ5FYB0 599 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-208ENST00000478423 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.84□□□□□ -0.35
NPHP4-208ENST00000478423 OR4D11Q8NGI4 311 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 ANKRD9Q96BM1 317 aaPredicted RBP12.84□□□□□ -0.35
NPHP4-208ENST00000478423 ZCCHC4Q9H5U6 513 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 TP53TG5Q9Y2B4 290 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 OR6C68A6NDL8 312 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 TNFSF14O43557 240 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 ACSM1Q08AH1 577 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 SHBQ15464 509 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 HEPHL1Q6MZM0 1159 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 CD300LDQ6UXZ3 194 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 OR4D9Q8NGE8 314 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 OCSTAMPQ9BR26 566 aa12.84□□□□□ -0.35
NPHP4-208ENST00000478423 SLIRPQ9GZT3 109 aaKnown RBP12.84□□□□□ -0.35
NPHP4-208ENST00000478423 LPLP06858 475 aa12.83□□□□□ -0.36
NPHP4-208ENST00000478423 EPXP11678 715 aa12.83□□□□□ -0.36
NPHP4-208ENST00000478423 B4GALT1P15291 398 aa12.83□□□□□ -0.36
NPHP4-208ENST00000478423 RHEBQ15382 184 aa12.83□□□□□ -0.36
NPHP4-208ENST00000478423 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.83□□□□□ -0.36
NPHP4-208ENST00000478423 TMEM185AQ8NFB2 350 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms