RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 MSL2Q9HCI7 577 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 ARL8BQ9NVJ2 186 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 PLEK2Q9NYT0 353 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 ASH2LQ9UBL3 628 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 TAGLN3Q9UI15 199 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 STARD10Q9Y365 291 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 GRIP1Q9Y3R0 1128 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 CLDN25C9JDP6 229 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 DCTN6O00399 190 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 ARPC2O15144 300 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 ARPC3O15145 178 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 PLPP2O43688 288 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 GSTM3P21266 225 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 FPR3P25089 353 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 CRABP1P29762 137 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 HIST1H3AP68431 136 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 SLC3A1Q07837 685 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 SPATS1Q496A3 300 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 SPRNQ5BIV9 151 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 ZMAT1Q5H9K5 638 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 HIST2H3PS2Q5TEC6 136 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 C1orf94Q6P1W5 598 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 HIST2H3AQ71DI3 136 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 NPEPL1Q8NDH3 523 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 OR1F12Q8NHA8 337 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 SLC7A6Q92536 515 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 PTP4A1Q93096 173 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 MCUR1Q96AQ8 359 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 HAVCR1Q96D42 359 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 TIMD4Q96H15 378 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 COG8Q96MW5 612 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 TSSK2Q96PF2 358 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 ERMAPQ96PL5 475 aaPredicted RBP9.15□□□□□ -0.94
SEC13-214ENST00000476597 REPIN1Q9BWE0 567 aaKnown RBP9.15□□□□□ -0.94
SEC13-214ENST00000476597 OR52D1Q9H346 318 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 POFUT1Q9H488 388 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 IL1RAPQ9NPH3 570 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 ATPIF1Q9UII2 106 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 METRNQ9UJH8 293 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 PURGQ9UJV8 347 aaKnown RBP9.15□□□□□ -0.94
SEC13-214ENST00000476597 B9D1Q9UPM9 204 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 ARL2BPQ9Y2Y0 163 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 V9GYQ6 96 aa9.15□□□□□ -0.94
SEC13-214ENST00000476597 TENM1Q9UKZ4 2725 aa9.15□□□□□ -0.95
SEC13-214ENST00000476597 IGLV1-36A0A0B4J1U3 117 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 TRAV20A0A0B4J274 112 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 J3QW42 95 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 RER1O15258 196 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 TCF21O43680 179 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 TIMM8AO60220 97 aaPredicted RBP9.14□□□□□ -0.95
SEC13-214ENST00000476597 OR10H3O60404 316 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 PPP1R3DO95685 299 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 GPANK1O95872 356 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 IGHV2-5P01817 119 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 FABP3P05413 133 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 SLC6A6P31641 620 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 IFNGR2P38484 337 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 GSSP48637 474 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 HMGA2P52926 109 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 GNGT1P63211 74 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 TNFAIP6P98066 277 aaPredicted RBP9.14□□□□□ -0.95
SEC13-214ENST00000476597 SPIBQ01892 262 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 FAHD2BQ6P2I3 314 aaPredicted RBP9.14□□□□□ -0.95
SEC13-214ENST00000476597 LEG1Q6P5S2 330 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 DNM1P34Q6PK57 102 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 C16orf89Q6UX73 402 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 Q6ZR03 302 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 RINLQ6ZS11 566 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 OR6V1Q8N148 313 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 GJC3Q8NFK1 279 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 RAB39BQ96DA2 213 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 FAHD2AQ96GK7 314 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 SAMD8Q96LT4 415 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 DCLRE1CQ96SD1 692 aaKnown RBP9.14□□□□□ -0.95
SEC13-214ENST00000476597 NMNAT3Q96T66 252 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 C19orf24Q9BVV8 132 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 SRA1Q9HD15 236 aaKnown RBP9.14□□□□□ -0.95
SEC13-214ENST00000476597 G6PC2Q9NQR9 355 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 NDE1Q9NXR1 346 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 TMCC3Q9ULS5 477 aa9.14□□□□□ -0.95
SEC13-214ENST00000476597 IDH3BO43837 385 aa9.13□□□□□ -0.95
SEC13-214ENST00000476597 DCTN3O75935 186 aa9.13□□□□□ -0.95
SEC13-214ENST00000476597 AVPP01185 164 aa9.13□□□□□ -0.95
SEC13-214ENST00000476597 DBHP09172 617 aa9.13□□□□□ -0.95
SEC13-214ENST00000476597 RAC2P15153 192 aa9.13□□□□□ -0.95
SEC13-214ENST00000476597 HIST1H1CP16403 213 aaKnown RBP9.13□□□□□ -0.95
SEC13-214ENST00000476597 RRM2P31350 389 aa9.13□□□□□ -0.95
SEC13-214ENST00000476597 CENPAP49450 140 aa9.13□□□□□ -0.95
SEC13-214ENST00000476597 RGS6P49758 472 aa9.13□□□□□ -0.95
SEC13-214ENST00000476597 COX10Q12887 443 aa9.13□□□□□ -0.95
SEC13-214ENST00000476597 TSPAN31Q12999 210 aa9.13□□□□□ -0.95
SEC13-214ENST00000476597 MEP1BQ16820 701 aa9.13□□□□□ -0.95
SEC13-214ENST00000476597 RSPO1Q2MKA7 263 aaPredicted RBP9.13□□□□□ -0.95
SEC13-214ENST00000476597 PGM2L1Q6PCE3 622 aa9.13□□□□□ -0.95
SEC13-214ENST00000476597 C1orf229Q6ZS94 237 aaPredicted RBP9.13□□□□□ -0.95
SEC13-214ENST00000476597 ZBTB46Q86UZ6 589 aa9.13□□□□□ -0.95
SEC13-214ENST00000476597 JAZF1Q86VZ6 243 aa9.13□□□□□ -0.95
SEC13-214ENST00000476597 ZDHHC21Q8IVQ6 265 aa9.13□□□□□ -0.95
SEC13-214ENST00000476597 DEFB107AQ8IZN7 70 aa9.13□□□□□ -0.95
SEC13-214ENST00000476597 OR4K13Q8NH42 304 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms