RNA–Protein interactions for RNA: ENST00000475218.2

UPF3A-204, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best)

Gene UPF3A, Length 1,791 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-204ENST00000475218 GUCA1AP43080 201 aaPredicted RBP11.95□□□□□ -0.5
UPF3A-204ENST00000475218 GSSP48637 474 aa11.95□□□□□ -0.5
UPF3A-204ENST00000475218 LSM6P62312 80 aaKnown RBP11.95□□□□□ -0.5
UPF3A-204ENST00000475218 SPIBQ01892 262 aa11.95□□□□□ -0.5
UPF3A-204ENST00000475218 SCRN3Q0VDG4 424 aa11.95□□□□□ -0.5
UPF3A-204ENST00000475218 AQP6Q13520 282 aa11.95□□□□□ -0.5
UPF3A-204ENST00000475218 MOGQ16653 247 aa11.95□□□□□ -0.5
UPF3A-204ENST00000475218 SAMD4BQ5PRF9 694 aaKnown RBP11.95□□□□□ -0.5
UPF3A-204ENST00000475218 GLCCI1Q86VQ1 547 aa11.95□□□□□ -0.5
UPF3A-204ENST00000475218 OR6V1Q8N148 313 aa11.95□□□□□ -0.5
UPF3A-204ENST00000475218 OR52D1Q9H346 318 aa11.95□□□□□ -0.5
UPF3A-204ENST00000475218 RERGLQ9H628 205 aa11.95□□□□□ -0.5
UPF3A-204ENST00000475218 ZNF665Q9H7R5 613 aa11.95□□□□□ -0.5
UPF3A-204ENST00000475218 ELOVL3Q9HB03 270 aa11.95□□□□□ -0.5
UPF3A-204ENST00000475218 IL1RAPQ9NPH3 570 aa11.95□□□□□ -0.5
UPF3A-204ENST00000475218 G6PC2Q9NQR9 355 aa11.95□□□□□ -0.5
UPF3A-204ENST00000475218 DECR2Q9NUI1 292 aa11.95□□□□□ -0.5
UPF3A-204ENST00000475218 AURKCQ9UQB9 309 aa11.95□□□□□ -0.5
UPF3A-204ENST00000475218 VGLL3A8MV65 326 aa11.94□□□□□ -0.5
UPF3A-204ENST00000475218 IGHV2-5P01817 119 aa11.94□□□□□ -0.5
UPF3A-204ENST00000475218 ATP6V1B2P21281 511 aa11.94□□□□□ -0.5
UPF3A-204ENST00000475218 FPR3P25089 353 aa11.94□□□□□ -0.5
UPF3A-204ENST00000475218 CDK5R2Q13319 367 aa11.94□□□□□ -0.5
UPF3A-204ENST00000475218 RFX4Q33E94 735 aa11.94□□□□□ -0.5
UPF3A-204ENST00000475218 C1orf174Q8IYL3 243 aa11.94□□□□□ -0.5
UPF3A-204ENST00000475218 DEFB107AQ8IZN7 70 aa11.94□□□□□ -0.5
UPF3A-204ENST00000475218 FANK1Q8TC84 345 aa11.94□□□□□ -0.5
UPF3A-204ENST00000475218 ERMAPQ96PL5 475 aaPredicted RBP11.94□□□□□ -0.5
UPF3A-204ENST00000475218 LRRC37BQ96QE4 947 aa11.94□□□□□ -0.5
UPF3A-204ENST00000475218 C19orf24Q9BVV8 132 aa11.94□□□□□ -0.5
UPF3A-204ENST00000475218 PLEK2Q9NYT0 353 aa11.94□□□□□ -0.5
UPF3A-204ENST00000475218 PURGQ9UJV8 347 aaKnown RBP11.94□□□□□ -0.5
UPF3A-204ENST00000475218 CLDN25C9JDP6 229 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 ARPC3O15145 178 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 MT-ND5P03915 603 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 HIST1H1CP16403 213 aaKnown RBP11.93□□□□□ -0.5
UPF3A-204ENST00000475218 ITGA2P17301 1181 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 KITLGP21583 273 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 RRM2P31350 389 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 KRT72Q14CN4 511 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 MTX3Q5HYI7 312 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 PGBD2Q6P3X8 592 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 CORO6Q6QEF8 472 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 SLC26A10Q8NG04 563 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 OR1F12Q8NHA8 337 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 CCL17Q92583 94 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 SAMD8Q96LT4 415 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 NSMCE2Q96MF7 247 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 CCT8L2Q96SF2 557 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 NMNAT3Q96T66 252 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 B9D1Q9UPM9 204 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 GRIP1Q9Y3R0 1128 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 DYSFO75923 2080 aa11.93□□□□□ -0.5
UPF3A-204ENST00000475218 PLSCR5A0PG75 271 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 OR6C68A6NDL8 312 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 H0YHG0 523 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 TPD52L2O43399 206 aaKnown RBP11.92□□□□□ -0.5
UPF3A-204ENST00000475218 PLPP2O43688 288 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 RPS6KA3P51812 740 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 ARHGDIAP52565 204 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 TEKQ02763 1124 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 HFEQ30201 348 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 KRTAP27-1Q3LI81 207 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 C1orf94Q6P1W5 598 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 LEG1Q6P5S2 330 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 UNQ6126/PRO20091Q6UXV3 157 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 ZNF620Q6ZNG0 422 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 FITM2Q8N6M3 262 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 NPEPL1Q8NDH3 523 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 OR51F2Q8NH61 342 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 HAVCR1Q96D42 359 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 CMBLQ96DG6 245 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 ELMOD3Q96FG2 381 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 DDOQ99489 341 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 NDEL1Q9GZM8 345 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 FN3KQ9H479 309 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 CYSLTR2Q9NS75 346 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 CGGBP1Q9UFW8 167 aaPredicted RBP11.92□□□□□ -0.5
UPF3A-204ENST00000475218 ZDHHC8Q9ULC8 765 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 TCRBV5S2A0A599 114 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 TIMM8AO60220 97 aaPredicted RBP11.92□□□□□ -0.5
UPF3A-204ENST00000475218 OR10H3O60404 316 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 GMNNO75496 209 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 FABP3P05413 133 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 PSKH1P11801 424 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 LIPAP38571 399 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 HMGA2P52926 109 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 SMIM11AP58511 58 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 HLXQ14774 488 aaPredicted RBP11.92□□□□□ -0.5
UPF3A-204ENST00000475218 ZNF362Q5T0B9 420 aaPredicted RBP11.92□□□□□ -0.5
UPF3A-204ENST00000475218 ZNF770Q6IQ21 691 aaPredicted RBP11.92□□□□□ -0.5
UPF3A-204ENST00000475218 CFAP77Q6ZQR2 320 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.92□□□□□ -0.5
UPF3A-204ENST00000475218 ZBTB46Q86UZ6 589 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 ZDHHC21Q8IVQ6 265 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 OR4C15Q8NGM1 316 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 OR4K13Q8NH42 304 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 ZNRF4Q8WWF5 429 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 BTBD10Q9BSF8 475 aa11.92□□□□□ -0.5
UPF3A-204ENST00000475218 REPIN1Q9BWE0 567 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms