RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 TMEM129A0AVI4 362 aa16.04■□□□□ 0.16
CCDC171-206ENST00000474193 LCKP06239 509 aa16.04■□□□□ 0.16
CCDC171-206ENST00000474193 DAOP14920 347 aa16.04■□□□□ 0.16
CCDC171-206ENST00000474193 PCBD1P61457 104 aa16.04■□□□□ 0.16
CCDC171-206ENST00000474193 RIPK1Q13546 671 aa16.04■□□□□ 0.16
CCDC171-206ENST00000474193 GGTLC2Q14390 218 aa16.04■□□□□ 0.16
CCDC171-206ENST00000474193 TMEM249Q2WGJ8 235 aa16.04■□□□□ 0.16
CCDC171-206ENST00000474193 ZIK1Q3SY52 487 aaPredicted RBP16.04■□□□□ 0.16
CCDC171-206ENST00000474193 ACSM5Q6NUN0 579 aa16.04■□□□□ 0.16
CCDC171-206ENST00000474193 SLC25A47Q6Q0C1 308 aa16.04■□□□□ 0.16
CCDC171-206ENST00000474193 SLC37A3Q8NCC5 494 aa16.04■□□□□ 0.16
CCDC171-206ENST00000474193 OR2T4Q8NH00 348 aa16.04■□□□□ 0.16
CCDC171-206ENST00000474193 FGFBP3Q8TAT2 258 aa16.04■□□□□ 0.16
CCDC171-206ENST00000474193 SLC29A1Q99808 456 aa16.04■□□□□ 0.16
CCDC171-206ENST00000474193 BCL2L14Q9BZR8 327 aa16.04■□□□□ 0.16
CCDC171-206ENST00000474193 NUAK2Q9H093 628 aa16.04■□□□□ 0.16
CCDC171-206ENST00000474193 VCX3BQ9H321 246 aa16.04■□□□□ 0.16
CCDC171-206ENST00000474193 EIF3KQ9UBQ5 218 aaKnown RBP16.04■□□□□ 0.16
CCDC171-206ENST00000474193 NKX1-2Q9UD57 310 aaPredicted RBP16.04■□□□□ 0.16
CCDC171-206ENST00000474193 ABCA1O95477 2261 aa16.04■□□□□ 0.16
CCDC171-206ENST00000474193 A0A1W2PPW3 197 aa16.03■□□□□ 0.16
CCDC171-206ENST00000474193 CASQ2O14958 399 aaPredicted RBP16.03■□□□□ 0.16
CCDC171-206ENST00000474193 GPRIN2O60269 458 aa16.03■□□□□ 0.16
CCDC171-206ENST00000474193 CRLF1O75462 422 aa16.03■□□□□ 0.16
CCDC171-206ENST00000474193 CCNOP22674 350 aa16.03■□□□□ 0.16
CCDC171-206ENST00000474193 PEX2P28328 305 aa16.03■□□□□ 0.16
CCDC171-206ENST00000474193 NR4A2P43354 598 aa16.03■□□□□ 0.16
CCDC171-206ENST00000474193 GZMKP49863 264 aa16.03■□□□□ 0.16
CCDC171-206ENST00000474193 FAM27BQ5VT28 67 aa16.03■□□□□ 0.16
CCDC171-206ENST00000474193 GLB1L2Q8IW92 636 aa16.03■□□□□ 0.16
CCDC171-206ENST00000474193 CYB561A3Q8NBI2 242 aa16.03■□□□□ 0.16
CCDC171-206ENST00000474193 NPEPL1Q8NDH3 523 aa16.03■□□□□ 0.16
CCDC171-206ENST00000474193 ZNF555Q8NEP9 628 aa16.03■□□□□ 0.16
CCDC171-206ENST00000474193 UBASH3BQ8TF42 649 aa16.03■□□□□ 0.16
CCDC171-206ENST00000474193 NMD3Q96D46 503 aaKnown RBP16.03■□□□□ 0.16
CCDC171-206ENST00000474193 RDH12Q96NR8 316 aa16.03■□□□□ 0.16
CCDC171-206ENST00000474193 FOXN4Q96NZ1 517 aa16.03■□□□□ 0.16
CCDC171-206ENST00000474193 MRPL37Q9BZE1 423 aaKnown RBP16.03■□□□□ 0.16
CCDC171-206ENST00000474193 SMPD3Q9NY59 655 aaPredicted RBP16.03■□□□□ 0.16
CCDC171-206ENST00000474193 CR1P17927 2039 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 OR6C68A6NDL8 312 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 ZAR1LA6NP61 321 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 PRR23D1E9PI22 279 aaPredicted RBP16.02■□□□□ 0.16
CCDC171-206ENST00000474193 SURF4O15260 269 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 ATP6V1G2O95670 118 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 SNAP29O95721 258 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 MT-ND5P03915 603 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 PRR23D2P0DMB1 279 aaPredicted RBP16.02■□□□□ 0.16
CCDC171-206ENST00000474193 CTLA4P16410 223 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 CDAP32320 146 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 CDC42P60953 191 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 GLO1Q04760 184 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 CRMP1Q14194 572 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 NKPD1Q17RQ9 610 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 OGFRL1Q5TC84 451 aaPredicted RBP16.02■□□□□ 0.16
CCDC171-206ENST00000474193 SLX4IPQ5VYV7 408 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 ZNF584Q8IVC4 421 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 PROKR2Q8NFJ6 384 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 SYNPRQ8TBG9 265 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 SNX33Q8WV41 574 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 SYT3Q9BQG1 590 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 TOR3AQ9H497 397 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 SLCO1C1Q9NYB5 712 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 B9D1Q9UPM9 204 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 COA3Q9Y2R0 106 aaPredicted RBP16.02■□□□□ 0.16
CCDC171-206ENST00000474193 TIMM10BQ9Y5J6 103 aa16.02■□□□□ 0.16
CCDC171-206ENST00000474193 FN1P02751 2386 aaKnown RBP16.01■□□□□ 0.15
CCDC171-206ENST00000474193 C12orf71A8MTZ7 269 aa16.01■□□□□ 0.15
CCDC171-206ENST00000474193 HLA-DQA2P01906 255 aa16.01■□□□□ 0.15
CCDC171-206ENST00000474193 FAM157BP0CG42 384 aa16.01■□□□□ 0.15
CCDC171-206ENST00000474193 STOMP27105 288 aa16.01■□□□□ 0.15
CCDC171-206ENST00000474193 LAP3P28838 519 aa16.01■□□□□ 0.15
CCDC171-206ENST00000474193 GDI2P50395 445 aaKnown RBP16.01■□□□□ 0.15
CCDC171-206ENST00000474193 UCP2P55851 309 aa16.01■□□□□ 0.15
CCDC171-206ENST00000474193 KRTAP1-1Q07627 177 aa16.01■□□□□ 0.15
CCDC171-206ENST00000474193 PABPC1L2AQ5JQF8 200 aa16.01■□□□□ 0.15
CCDC171-206ENST00000474193 ARL9Q6T311 187 aa16.01■□□□□ 0.15
CCDC171-206ENST00000474193 C1orf174Q8IYL3 243 aa16.01■□□□□ 0.15
CCDC171-206ENST00000474193 OR6V1Q8N148 313 aa16.01■□□□□ 0.15
CCDC171-206ENST00000474193 ZCCHC24Q8N2G6 241 aaKnown RBP16.01■□□□□ 0.15
CCDC171-206ENST00000474193 ZNF786Q8N393 782 aa16.01■□□□□ 0.15
CCDC171-206ENST00000474193 TSSK2Q96PF2 358 aa16.01■□□□□ 0.15
CCDC171-206ENST00000474193 WACQ9BTA9 647 aa16.01■□□□□ 0.15
CCDC171-206ENST00000474193 RACGAP1Q9H0H5 632 aa16.01■□□□□ 0.15
CCDC171-206ENST00000474193 FN3KQ9H479 309 aa16.01■□□□□ 0.15
CCDC171-206ENST00000474193 IMPAD1Q9NX62 359 aa16.01■□□□□ 0.15
CCDC171-206ENST00000474193 H2AFY2Q9P0M6 372 aaPredicted RBP16.01■□□□□ 0.15
CCDC171-206ENST00000474193 ZANQ9Y493 2812 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 IGKV1D-43A0A0B4J1Z2 117 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 IFNA2P01563 188 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 CST2P09228 141 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 CCL2P13500 99 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 ZNF32P17041 273 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 MSR1P21757 451 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 APEX1P27695 318 aaKnown RBP16■□□□□ 0.15
CCDC171-206ENST00000474193 EPHA2P29317 976 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 POLR2IP36954 125 aaKnown RBP16■□□□□ 0.15
CCDC171-206ENST00000474193 BLVRAP53004 296 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 SLC25A1P53007 311 aa16■□□□□ 0.15
CCDC171-206ENST00000474193 KLF3P57682 345 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms