RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 OR6C68A6NDL8 312 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 NPIPB13A6NJU9 1138 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 NPIPB4C9JG80 1138 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 MS4A18H0YCH9 400 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 MYL12BO14950 172 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 SMAD9O15198 467 aaKnown RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 DNPH1O43598 174 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 TRAF3IP2O43734 574 aaPredicted RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 CXCL13O43927 109 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 EIF1BO60739 113 aaKnown RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 MRPS14O60783 128 aaKnown RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 TPPPO94811 219 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 BCL10O95999 233 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 PTHP01270 115 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 LCKP06239 509 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 MRPL3P09001 348 aaKnown RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 OCM2P0CE71 109 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 OCMP0CE72 109 aaPredicted RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 MYL12AP19105 171 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 PCMT1P22061 227 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 ENPP1P22413 925 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 PSMB9P28065 219 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 C21orf33P30042 268 aaPredicted RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 PYCR1P32322 319 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 TIMP3P35625 211 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 NAA10P41227 235 aaPredicted RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 CDKN2AP42771 156 aaKnown RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 LHX2P50458 406 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 AGFG1P52594 562 aaKnown RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 SLC25A1P53007 311 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 BIDP55957 195 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 MVKQ03426 396 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 SRYQ05066 204 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 RAB40BQ12829 278 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 IKZF1Q13422 519 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 C1DQ13901 141 aaKnown RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 RAB39AQ14964 217 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 ZNF239Q16600 458 aaKnown RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 MS4A18Q3C1V0 323 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 KLHL22Q53GT1 634 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 SMUG1Q53HV7 270 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 PDSS1Q5T2R2 415 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 ARMC4Q5T2S8 1044 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 EEF1A1P5Q5VTE0 462 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 XAF1Q6GPH4 301 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 ABLIM2Q6H8Q1 611 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 B3GLCTQ6Y288 498 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 SLC35D2Q76EJ3 337 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 ZNF367Q7RTV3 350 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 HDDC2Q7Z4H3 204 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 GPR141Q7Z602 305 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 PXKQ7Z7A4 578 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 PM20D2Q8IYS1 436 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 Q8N1Y9 231 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 MINDY2Q8NBR6 621 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 NOXO1Q8NFA2 376 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 PROKR2Q8NFJ6 384 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 OR4F15Q8NGB8 312 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 OR51L1Q8NGJ5 315 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 OR51G2Q8NGK0 314 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 OR52I1Q8NGK6 324 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 OR10D3Q8NH80 312 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 NEIL3Q8TAT5 605 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 IGFBPL1Q8WX77 278 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 FCGR1BQ92637 280 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 PIGTQ969N2 578 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 FBXW5Q969U6 566 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 MUL1Q969V5 352 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 ZMYND19Q96E35 227 aaPredicted RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 MISP3Q96FF7 219 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 TMEM80Q96HE8 168 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 MAP6Q96JE9 813 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 ADGRG7Q96K78 797 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 TSSK2Q96PF2 358 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 CNN2Q99439 309 aaKnown RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 NAA11Q9BSU3 229 aaPredicted RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 NMNAT2Q9BZQ4 307 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 SYT4Q9H2B2 425 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 RERGLQ9H628 205 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 LDAHQ9H6V9 325 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 IFT22Q9H7X7 185 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 MED29Q9NX70 200 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 WARS2Q9UGM6 360 aaKnown RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 ZNF346Q9UL40 294 aaKnown RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 RASD1Q9Y272 281 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 TRAPPC4Q9Y296 219 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 EXOSC1Q9Y3B2 195 aaKnown RBP5.61□□□□□ -1.51
HDAC1-205ENST00000472928 NOX1Q9Y5S8 564 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 SVEP1Q4LDE5 3571 aa5.61□□□□□ -1.51
HDAC1-205ENST00000472928 CADP27708 2225 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 RAI1Q7Z5J4 1906 aaPredicted RBP5.6□□□□□ -1.51
HDAC1-205ENST00000472928 NOTCH1P46531 2555 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 PRSS37A4D1T9 235 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 DEFB108AA8MXU0 73 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 AHRRA9YTQ3 701 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 EEF1E1-BLOC1S5C9J1V9 151 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 H3BSA7 217 aa5.6□□□□□ -1.51
HDAC1-205ENST00000472928 PHF1O43189 567 aaPredicted RBP5.6□□□□□ -1.51
HDAC1-205ENST00000472928 EEF1E1O43324 174 aaKnown RBP5.6□□□□□ -1.51
HDAC1-205ENST00000472928 AKAP8O43823 692 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms