RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 CTSFQ9UBX1 484 aa2.24□□□□□ -2.05
PTCD3-209ENST00000472044 KIF26AQ9ULI4 1882 aaPredicted RBP2.24□□□□□ -2.05
PTCD3-209ENST00000472044 INSRP06213 1382 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 CACNG3O60359 315 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 GCM2O75603 506 aaPredicted RBP2.23□□□□□ -2.05
PTCD3-209ENST00000472044 YIF1AO95070 293 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 FGFR1OPO95684 399 aaKnown RBP2.23□□□□□ -2.05
PTCD3-209ENST00000472044 CTSLP07711 333 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 UBTFL6P0CB48 400 aaPredicted RBP2.23□□□□□ -2.05
PTCD3-209ENST00000472044 EIF2S2P20042 333 aaKnown RBP2.23□□□□□ -2.05
PTCD3-209ENST00000472044 RAB3AP20336 220 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 BCKDHBP21953 392 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 STOMP27105 288 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 CEACAM3P40198 252 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 EIF3EP60228 445 aaKnown RBP2.23□□□□□ -2.05
PTCD3-209ENST00000472044 UBE2NP61088 152 aaKnown RBP2.23□□□□□ -2.05
PTCD3-209ENST00000472044 PRR3P79522 188 aaKnown RBP2.23□□□□□ -2.05
PTCD3-209ENST00000472044 CDH17Q12864 832 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 TRAM2Q15035 370 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 STK11Q15831 433 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 ORMDL2Q53FV1 153 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 AVPI1Q5T686 147 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 SPESP1Q6UW49 350 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 MBOAT1Q6ZNC8 495 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 GABRG1Q8N1C3 465 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 PQLC3Q8N755 202 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 ZFP41Q8N8Y5 198 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 OR5K2Q8NHB8 316 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 NUBPLQ8TB37 319 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 FRZBQ92765 325 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 TMEM230Q96A57 120 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 EEF1AKMT3Q96AZ1 226 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 GSDMAQ96QA5 445 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 XPO6Q96QU8 1125 aaKnown RBP2.23□□□□□ -2.05
PTCD3-209ENST00000472044 SPIN2AQ99865 258 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 MICU1Q9BPX6 476 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 SPIN2BQ9BPZ2 258 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 DDX19AQ9NUU7 478 aaKnown RBP2.23□□□□□ -2.05
PTCD3-209ENST00000472044 RFNGQ9Y644 331 aa2.23□□□□□ -2.05
PTCD3-209ENST00000472044 KCNE1BA0A087WTH5 132 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 KBTBD11-OT1A0A1B0GTJ5 212 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 TMEM223A0PJW6 202 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 A6NDN8 102 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 H7C0C1 242 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 RAD51CO43502 376 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 ZNF207O43670 478 aaKnown RBP2.22□□□□□ -2.05
PTCD3-209ENST00000472044 ARG1P05089 322 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 TPM2P07951 284 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 ERCC1P07992 297 aaPredicted RBP2.22□□□□□ -2.05
PTCD3-209ENST00000472044 CD3GP09693 182 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 RHOXF2BP0C7M4 288 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 GALP22466 123 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 UQCRFS1P47985 274 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 ATP5OP48047 213 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 P2RX1P51575 399 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 CRISP1P54107 249 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 SEMG2Q02383 582 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 PSMD5Q16401 504 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 GPR107Q5VW38 600 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 FBXW9Q5XUX1 488 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 TMEM205Q6UW68 189 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 RIMKLAQ8IXN7 391 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 PIFOQ8TCI5 191 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 COL21A1Q96P44 957 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 CAMK2N2Q96S95 79 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 C11orf70Q9BRQ4 267 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 ZYG11BQ9C0D3 744 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 AUNIPQ9H7T9 357 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 C20orf96Q9NUD7 363 aaPredicted RBP2.22□□□□□ -2.05
PTCD3-209ENST00000472044 CLN8Q9UBY8 286 aa2.22□□□□□ -2.05
PTCD3-209ENST00000472044 AHDC1Q5TGY3 1603 aaPredicted RBP2.21□□□□□ -2.06
PTCD3-209ENST00000472044 DOCK8Q8NF50 2099 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 SPRR5A0A1B0GTR4 108 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 TMEM150BA6NC51 233 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 OR6C74A6NCV1 312 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 K7EMT4 169 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 BPY2O14599 106 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 CTAG2O75638 210 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 FLOT1O75955 427 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 CD160O95971 181 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 MUC1P15941 1255 aaPredicted RBP2.21□□□□□ -2.06
PTCD3-209ENST00000472044 GGT1P19440 569 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 DTYMKP23919 212 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 U2AF2P26368 475 aaKnown RBP eCLIP2.21□□□□□ -2.063e-15■□□□□ 9.3
PTCD3-209ENST00000472044 OR1E1P30953 314 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 SSTR5P35346 364 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 PMELP40967 661 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 HCAR3P49019 387 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 IFT88Q13099 833 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 IL18Q14116 193 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 RCAN2Q14206 197 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 KIR2DS1Q14954 304 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 FHOD3Q2V2M9 1422 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 ABCA11PQ4W5N1 156 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 FAM78AQ5JUQ0 283 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 STUMQ69YW2 141 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 MBOAT2Q6ZWT7 520 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 ABHD12BQ7Z5M8 362 aaPredicted RBP2.21□□□□□ -2.06
PTCD3-209ENST00000472044 METTL13Q8N6R0 699 aa2.21□□□□□ -2.06
PTCD3-209ENST00000472044 TTC29Q8NA56 475 aaPredicted RBP2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms