RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 LDLRAD4O15165 306 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 AKR7A2O43488 359 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 EIF1BO60739 113 aaKnown RBP9.48□□□□□ -0.89
APLF-204ENST00000471727 VAMP5O95183 116 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 PMS2P2O95744 297 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 WNT11O96014 354 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 PGA4P0DJD7 388 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 PGA3P0DJD8 388 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 TMIGD3P0DMS9 266 aaPredicted RBP9.48□□□□□ -0.89
APLF-204ENST00000471727 GTF2F2P13984 249 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 ZNF43P17038 809 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 BDKRB2P30411 391 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 GALK2Q01415 458 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 MC2RQ01718 297 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 FMODQ06828 376 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 EIF3IQ13347 325 aaKnown RBP9.48□□□□□ -0.89
APLF-204ENST00000471727 GLYATL3Q5SZD4 288 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 SLC25A47Q6Q0C1 308 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 GTPBP8Q8N3Z3 284 aaPredicted RBP9.48□□□□□ -0.89
APLF-204ENST00000471727 BEST4Q8NFU0 473 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 OR5D14Q8NGL3 314 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 CCDC107Q8WV48 283 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 GCDHQ92947 438 aaPredicted RBP9.48□□□□□ -0.89
APLF-204ENST00000471727 SNAPC3Q92966 411 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 CDX2Q99626 313 aaPredicted RBP9.48□□□□□ -0.89
APLF-204ENST00000471727 NPAS1Q99742 590 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 SLC25A21Q9BQT8 299 aaPredicted RBP9.48□□□□□ -0.89
APLF-204ENST00000471727 FAM206AQ9NX38 181 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 OCIAD1Q9NX40 245 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 FBLN5Q9UBX5 448 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 FLVCR2Q9UPI3 526 aa9.48□□□□□ -0.89
APLF-204ENST00000471727 IGHV1-45A0A0A0MS14 117 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 AQP7P3A6NL99 342 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 D6RAR5 112 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 LAMTOR5O43504 91 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 RGS11O94810 467 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 OR2A4O95047 310 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 TDGF1P13385 188 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 HTR2BP41595 481 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 GUCA1AP43080 201 aaPredicted RBP9.47□□□□□ -0.89
APLF-204ENST00000471727 P2RY4P51582 365 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 EFNB2P52799 333 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 PER3P56645 1201 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 FOXL2P58012 376 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 PSMA6P60900 246 aaKnown RBP9.47□□□□□ -0.89
APLF-204ENST00000471727 DHODHQ02127 395 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 ZFP36L1Q07352 338 aaKnown RBP9.47□□□□□ -0.89
APLF-204ENST00000471727 C19orf57Q0VDD7 668 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 MPPED2Q15777 294 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 TMEM255AQ5JRV8 349 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 ZBTB37Q5TC79 503 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 ASPHD2Q6ICH7 369 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 STEAP1BQ6NZ63 245 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 TSSK4Q6SA08 328 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 TMPPEQ6ZT21 453 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 NLRC3Q7RTR2 1065 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 MDGA2Q7Z553 956 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 LYPD6Q86Y78 171 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 LINC00346Q8IVM7 164 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 SLC22A24Q8N4F4 322 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 PLPP7Q8NBV4 271 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 CLEC1AQ8NC01 280 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 OR8H1Q8NGG4 311 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 OR4C16Q8NGL9 310 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 PPP1R14AQ96A00 147 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 IMMP1LQ96LU5 166 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 OR5B2Q96R09 309 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 OR2A7Q96R45 310 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 ANGPTL4Q9BY76 406 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 TMPRSS13Q9BYE2 586 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 PBOV1Q9GZY1 135 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 APMAPQ9HDC9 416 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 MYOZ1Q9NP98 299 aaPredicted RBP9.47□□□□□ -0.89
APLF-204ENST00000471727 TMEM138Q9NPI0 162 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 MGAT4CQ9UBM8 478 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 ELF5Q9UKW6 265 aaPredicted RBP9.47□□□□□ -0.89
APLF-204ENST00000471727 CHCHD2Q9Y6H1 151 aaPredicted RBP9.47□□□□□ -0.89
APLF-204ENST00000471727 EML5Q05BV3 1969 aa9.47□□□□□ -0.89
APLF-204ENST00000471727 TP53BP1Q12888 1972 aaPredicted RBP9.47□□□□□ -0.89
APLF-204ENST00000471727 CPAMD8Q8IZJ3 1885 aa9.46□□□□□ -0.89
APLF-204ENST00000471727 IGKV1D-43A0A0B4J1Z2 117 aa9.46□□□□□ -0.89
APLF-204ENST00000471727 SYT7O43581 403 aa9.46□□□□□ -0.89
APLF-204ENST00000471727 TRAF3IP2O43734 574 aaPredicted RBP9.46□□□□□ -0.89
APLF-204ENST00000471727 DOK2O60496 412 aa9.46□□□□□ -0.89
APLF-204ENST00000471727 BPNT1O95861 308 aa9.46□□□□□ -0.89
APLF-204ENST00000471727 IFNA7P01567 189 aa9.46□□□□□ -0.89
APLF-204ENST00000471727 CFIP05156 583 aa9.46□□□□□ -0.89
APLF-204ENST00000471727 ACSM4P0C7M7 580 aa9.46□□□□□ -0.89
APLF-204ENST00000471727 RAD52P43351 418 aa9.46□□□□□ -0.89
APLF-204ENST00000471727 DSCR4P56555 118 aaPredicted RBP9.46□□□□□ -0.89
APLF-204ENST00000471727 SNRPD2P62316 118 aaKnown RBP9.46□□□□□ -0.89
APLF-204ENST00000471727 GABREP78334 506 aa9.46□□□□□ -0.89
APLF-204ENST00000471727 ZMYND11Q15326 602 aa9.46□□□□□ -0.89
APLF-204ENST00000471727 HIST3H3Q16695 136 aa9.46□□□□□ -0.89
APLF-204ENST00000471727 LCN10Q6JVE6 187 aa9.46□□□□□ -0.89
APLF-204ENST00000471727 Q6ZTK2 550 aa9.46□□□□□ -0.89
APLF-204ENST00000471727 PGAP1Q75T13 922 aa9.46□□□□□ -0.89
APLF-204ENST00000471727 SLC36A1Q7Z2H8 476 aa9.46□□□□□ -0.89
APLF-204ENST00000471727 JAGN1Q8N5M9 183 aa9.46□□□□□ -0.89
APLF-204ENST00000471727 BMPERQ8N8U9 685 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms