RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 RNASE6Q93091 150 aaKnown RBP16.73■□□□□ 0.27
PSPC1-203ENST00000471658 ZNF75AQ96N20 296 aa16.73■□□□□ 0.27
PSPC1-203ENST00000471658 OR8B4Q96RC9 309 aa16.73■□□□□ 0.27
PSPC1-203ENST00000471658 CHCHD3Q9NX63 227 aaKnown RBP16.73■□□□□ 0.27
PSPC1-203ENST00000471658 PLEK2Q9NYT0 353 aa16.73■□□□□ 0.27
PSPC1-203ENST00000471658 IKZF2Q9UKS7 526 aa16.73■□□□□ 0.27
PSPC1-203ENST00000471658 SNX5Q9Y5X3 404 aa16.73■□□□□ 0.27
PSPC1-203ENST00000471658 CACNA1CQ13936 2221 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 J3QLW9 94 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 SGCEO43556 437 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 UBL3O95164 117 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 CLDN14O95500 239 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 HOXB1P14653 301 aaPredicted RBP16.72■□□□□ 0.27
PSPC1-203ENST00000471658 ZNF19P17023 458 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 SCRN3Q0VDG4 424 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 RAB39AQ14964 217 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 TAB1Q15750 504 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 GSG1Q2KHT4 349 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 RSPO1Q2MKA7 263 aaPredicted RBP16.72■□□□□ 0.27
PSPC1-203ENST00000471658 ELFN2Q5R3F8 820 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 RNLSQ5VYX0 342 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 SPRYD4Q8WW59 207 aaPredicted RBP16.72■□□□□ 0.27
PSPC1-203ENST00000471658 GATAD2BQ8WXI9 593 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 ASB17Q8WXJ9 295 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 MS4A3Q96HJ5 214 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 C4orf36Q96KX1 117 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 OR5M11Q96RB7 305 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 ELOVL3Q9HB03 270 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 FBXL3Q9UKT7 428 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 SLC25A15Q9Y619 301 aa16.72■□□□□ 0.27
PSPC1-203ENST00000471658 A0A087WXM4 84 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 PHYHO14832 338 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 DOK2O60496 412 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 CELA3BP08861 270 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 PLA2G2AP14555 144 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 AGAP20933 346 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 PCMT1P22061 227 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 HOXC12P31275 282 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 OPRL1P41146 370 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 CDONQ4KMG0 1287 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 TIMM23BQ5SRD1 257 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 TMEM53Q6P2H8 277 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 KRT77Q7Z794 578 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 MYPOPQ86VE0 399 aaPredicted RBP16.71■□□□□ 0.27
PSPC1-203ENST00000471658 ZNF584Q8IVC4 421 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 CCDC36Q8IYA8 594 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 KLHL36Q8N4N3 616 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 NANOS1Q8WY41 292 aaKnown RBP16.71■□□□□ 0.27
PSPC1-203ENST00000471658 WACQ9BTA9 647 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 ACOT13Q9NPJ3 140 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 GNG8Q9UK08 70 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 ERGIC3Q9Y282 383 aa16.71■□□□□ 0.27
PSPC1-203ENST00000471658 SYNGR3O43761 229 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 ABHD16AO95870 558 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 LCKP06239 509 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 DBHP09172 617 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 APEX1P27695 318 aaKnown RBP16.7■□□□□ 0.26
PSPC1-203ENST00000471658 ARR3P36575 388 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 ROM1Q03395 351 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 EGR3Q06889 387 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 RAB35Q15286 201 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 KCTD8Q6ZWB6 473 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 ZNF679Q8IYX0 411 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 ZNF485Q8NCK3 441 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 OR1F12Q8NHA8 337 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 ACOXLQ9NUZ1 547 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 LSM2Q9Y333 95 aaKnown RBP16.7■□□□□ 0.26
PSPC1-203ENST00000471658 CAB39Q9Y376 341 aaPredicted RBP16.7■□□□□ 0.26
PSPC1-203ENST00000471658 LRP12Q9Y561 859 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 PRR14LQ5THK1 2151 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 TMEM129A0AVI4 362 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 METTL15A6NJ78 407 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 ZNF878C9JN71 531 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 E9PI62 339 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 MYL12BO14950 172 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 MRPS14O60783 128 aaKnown RBP16.7■□□□□ 0.26
PSPC1-203ENST00000471658 RPP14O95059 124 aaKnown RBP16.7■□□□□ 0.26
PSPC1-203ENST00000471658 H2BFMP0C1H6 154 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 CCL2P13500 99 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 PSMB10P40306 273 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 HTR5AP47898 357 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 PRKXP51817 358 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 KCTD18Q6PI47 426 aaPredicted RBP16.7■□□□□ 0.26
PSPC1-203ENST00000471658 DPPA2Q7Z7J5 298 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 YIPF7Q8N8F6 280 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 RNF166Q96A37 237 aaPredicted RBP16.7■□□□□ 0.26
PSPC1-203ENST00000471658 ZC3HAV1LQ96H79 300 aaKnown RBP16.7■□□□□ 0.26
PSPC1-203ENST00000471658 WFIKKN1Q96NZ8 548 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 ATF6BQ99941 703 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 AMDHD2Q9Y303 409 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 GRIP1Q9Y3R0 1128 aa16.7■□□□□ 0.26
PSPC1-203ENST00000471658 LOC100509620A0A075B734 347 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 OR6C6A6NF89 314 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 TRIM64CA6NLI5 447 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 LALBAP00709 142 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 KRT8P05787 483 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 THBDP07204 575 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 CBR1P16152 277 aa16.69■□□□□ 0.26
PSPC1-203ENST00000471658 IDH3GP51553 393 aaPredicted RBP16.69■□□□□ 0.26
PSPC1-203ENST00000471658 GALK2Q01415 458 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms