RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 OR1F12Q8NHA8 337 aa12.72□□□□□ -0.37
HOXB3-206ENST00000471459 TMEM158Q8WZ71 300 aa12.72□□□□□ -0.37
HOXB3-206ENST00000471459 YIPF5Q969M3 257 aa12.72□□□□□ -0.37
HOXB3-206ENST00000471459 SAMD8Q96LT4 415 aa12.72□□□□□ -0.37
HOXB3-206ENST00000471459 LRGUKQ96M69 825 aa12.72□□□□□ -0.37
HOXB3-206ENST00000471459 DCLRE1CQ96SD1 692 aaKnown RBP12.72□□□□□ -0.37
HOXB3-206ENST00000471459 NARFLQ9H6Q4 476 aa12.72□□□□□ -0.37
HOXB3-206ENST00000471459 CHD3Q12873 2000 aaKnown RBP12.72□□□□□ -0.37
HOXB3-206ENST00000471459 RTTNQ86VV8 2226 aa12.72□□□□□ -0.37
HOXB3-206ENST00000471459 OR6C6A6NF89 314 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 RNF212BA8MTL3 300 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 NCR1O76036 304 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 HLA-DQA2P01906 255 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 THBS2P35442 1172 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 SRP14P37108 136 aaKnown RBP12.71□□□□□ -0.37
HOXB3-206ENST00000471459 HMGA2P52926 109 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 DVL1P1P54792 670 aaPredicted RBP12.71□□□□□ -0.37
HOXB3-206ENST00000471459 TRIM25Q14258 630 aaKnown RBP12.71□□□□□ -0.37
HOXB3-206ENST00000471459 CR1LQ2VPA4 569 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 FAM98BQ52LJ0 330 aaKnown RBP12.71□□□□□ -0.37
HOXB3-206ENST00000471459 PTCHD4Q6ZW05 846 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 RFPL4BQ6ZWI9 263 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.71□□□□□ -0.37
HOXB3-206ENST00000471459 OR2AJ1Q8NGZ0 328 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 OR4K13Q8NH42 304 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 CLDND2Q8NHS1 167 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 CCL17Q92583 94 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 PTP4A1Q93096 173 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 NMNAT3Q96T66 252 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 MDFIQ99750 246 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 GPA33Q99795 319 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 TRIM15Q9C019 465 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 TREM2Q9NZC2 230 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 ATPIF1Q9UII2 106 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 B9D1Q9UPM9 204 aa12.71□□□□□ -0.37
HOXB3-206ENST00000471459 J3QW42 95 aa12.7□□□□□ -0.38
HOXB3-206ENST00000471459 SURF4O15260 269 aa12.7□□□□□ -0.38
HOXB3-206ENST00000471459 RP2O75695 350 aa12.7□□□□□ -0.38
HOXB3-206ENST00000471459 CCNB2O95067 398 aa12.7□□□□□ -0.38
HOXB3-206ENST00000471459 MPZL1O95297 269 aa12.7□□□□□ -0.38
HOXB3-206ENST00000471459 IGHV1-46P01743 117 aa12.7□□□□□ -0.38
HOXB3-206ENST00000471459 IL2RGP31785 369 aa12.7□□□□□ -0.38
HOXB3-206ENST00000471459 GSSP48637 474 aa12.7□□□□□ -0.38
HOXB3-206ENST00000471459 MMP15P51511 669 aa12.7□□□□□ -0.38
HOXB3-206ENST00000471459 FXYD6P3P58550 94 aa12.7□□□□□ -0.38
HOXB3-206ENST00000471459 MVKQ03426 396 aa12.7□□□□□ -0.38
HOXB3-206ENST00000471459 CXXC5Q7LFL8 322 aaKnown RBP12.7□□□□□ -0.38
HOXB3-206ENST00000471459 RAB39BQ96DA2 213 aa12.7□□□□□ -0.38
HOXB3-206ENST00000471459 C1orf159Q96HA4 380 aa12.7□□□□□ -0.38
HOXB3-206ENST00000471459 HDHD2Q9H0R4 259 aa12.7□□□□□ -0.38
HOXB3-206ENST00000471459 MAGIXQ9H6Y5 334 aa12.7□□□□□ -0.38
HOXB3-206ENST00000471459 RPRD1BQ9NQG5 326 aaKnown RBP12.7□□□□□ -0.38
HOXB3-206ENST00000471459 PRPF19Q9UMS4 504 aaKnown RBP12.7□□□□□ -0.38
HOXB3-206ENST00000471459 RER1O15258 196 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 ADH4P08319 380 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 HIST1H1CP16403 213 aaKnown RBP12.69□□□□□ -0.38
HOXB3-206ENST00000471459 ZNF823P16415 610 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 TNFRSF1AP19438 455 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 TNFAIP6P98066 277 aaPredicted RBP12.69□□□□□ -0.38
HOXB3-206ENST00000471459 ECH1Q13011 328 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 PSG7Q13046 419 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 SLC35F1Q5T1Q4 408 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 ACSM5Q6NUN0 579 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 SLC27A4Q6P1M0 643 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 PGBD2Q6P3X8 592 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 OR6V1Q8N148 313 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 TEX29Q8N6K0 151 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 OR52E2Q8NGJ4 325 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 OR51F2Q8NH61 342 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 SPATA3Q8NHX4 192 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 APOBEC3DQ96AK3 386 aaPredicted RBP12.69□□□□□ -0.38
HOXB3-206ENST00000471459 HAVCR1Q96D42 359 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 CMBLQ96DG6 245 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 TSSK2Q96PF2 358 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 SOX7Q9BT81 388 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 RACGAP1Q9H0H5 632 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 REEP1Q9H902 201 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 KLHL21Q9UJP4 597 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 PURGQ9UJV8 347 aaKnown RBP12.69□□□□□ -0.38
HOXB3-206ENST00000471459 STARD10Q9Y365 291 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 LYVE1Q9Y5Y7 322 aa12.69□□□□□ -0.38
HOXB3-206ENST00000471459 MSMBP08118 114 aa12.68□□□□□ -0.38
HOXB3-206ENST00000471459 GAAP10253 952 aa12.68□□□□□ -0.38
HOXB3-206ENST00000471459 RAC2P15153 192 aa12.68□□□□□ -0.38
HOXB3-206ENST00000471459 HOXB6P17509 224 aaKnown RBP12.68□□□□□ -0.38
HOXB3-206ENST00000471459 SCGB2A2Q13296 93 aa12.68□□□□□ -0.38
HOXB3-206ENST00000471459 CCDC92Q53HC0 331 aaPredicted RBP12.68□□□□□ -0.38
HOXB3-206ENST00000471459 CLEC12AQ5QGZ9 265 aa12.68□□□□□ -0.38
HOXB3-206ENST00000471459 AVPI1Q5T686 147 aa12.68□□□□□ -0.38
HOXB3-206ENST00000471459 LIPNQ5VXI9 398 aa12.68□□□□□ -0.38
HOXB3-206ENST00000471459 LCN8Q6JVE9 175 aa12.68□□□□□ -0.38
HOXB3-206ENST00000471459 ZNF620Q6ZNG0 422 aa12.68□□□□□ -0.38
HOXB3-206ENST00000471459 IL17RELQ6ZVW7 336 aa12.68□□□□□ -0.38
HOXB3-206ENST00000471459 OR2T4Q8NH00 348 aa12.68□□□□□ -0.38
HOXB3-206ENST00000471459 GTF3AQ92664 365 aaKnown RBP12.68□□□□□ -0.38
HOXB3-206ENST00000471459 TMEM186Q96B77 213 aa12.68□□□□□ -0.38
HOXB3-206ENST00000471459 PITX2Q99697 317 aa12.68□□□□□ -0.38
HOXB3-206ENST00000471459 COQ7Q99807 217 aa12.68□□□□□ -0.38
HOXB3-206ENST00000471459 C1orf21Q9H246 121 aa12.68□□□□□ -0.38
HOXB3-206ENST00000471459 MSL2Q9HCI7 577 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms