RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 FUNDC2Q9BWH2 189 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 BCL2L14Q9BZR8 327 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 SIAEQ9HAT2 523 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 PLCXD1Q9NUJ7 323 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 REV1Q9UBZ9 1251 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 GPR160Q9UJ42 338 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 ZNF346Q9UL40 294 aaKnown RBP11.61□□□□□ -0.55
HMGN1-211ENST00000471260 SAMHD1Q9Y3Z3 626 aaKnown RBP11.61□□□□□ -0.55
HMGN1-211ENST00000471260 GMPPBQ9Y5P6 360 aa11.61□□□□□ -0.55
HMGN1-211ENST00000471260 IGHV4-61A0A0C4DH41 118 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 IQCMA0A1B0GVH7 501 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 RGS10O43665 173 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 IGHMP01871 453 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 IGFBP1P08833 259 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-211ENST00000471260 PATE4P0C8F1 98 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 IFI30P13284 250 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 THBS2P35442 1172 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 RAD52P43351 418 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 RUNX1T1Q06455 604 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 TMED1Q13445 227 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 RIN1Q13671 783 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 LAPTM4AQ15012 233 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 MAD2L1BPQ15013 274 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-211ENST00000471260 TRAM2Q15035 370 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 TBCEQ15813 527 aaPredicted RBP11.6□□□□□ -0.55
HMGN1-211ENST00000471260 TBC1D28Q2M2D7 210 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 THEM4Q5T1C6 240 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 FAM205BPQ63HN1 556 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 SLC16A12Q6ZSM3 486 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 ZCCHC24Q8N2G6 241 aaKnown RBP11.6□□□□□ -0.55
HMGN1-211ENST00000471260 SYT14Q8NB59 555 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 SPATA3Q8NHX4 192 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 MSI2Q96DH6 328 aaKnown RBP11.6□□□□□ -0.55
HMGN1-211ENST00000471260 SIGLEC11Q96RL6 698 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 ALG12Q9BV10 488 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 FNDC11Q9BVV2 318 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 BEX2Q9BXY8 128 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 SHARPINQ9H0F6 387 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 VNN3Q9NY84 501 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 WARS2Q9UGM6 360 aaKnown RBP11.6□□□□□ -0.55
HMGN1-211ENST00000471260 KCNS2Q9ULS6 477 aa11.6□□□□□ -0.55
HMGN1-211ENST00000471260 LOC100289279A0A1B0GTE1 492 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 CLDN25C9JDP6 229 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 MMP7P09237 267 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-211ENST00000471260 ANXA8P13928 327 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 ZNF250P15622 560 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 ZNF16P17020 682 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-211ENST00000471260 GUCA1AP43080 201 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-211ENST00000471260 SLC9A3P48764 834 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 DAPP51397 102 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 GP2P55259 537 aaKnown RBP11.59□□□□□ -0.55
HMGN1-211ENST00000471260 RPL27P61353 136 aaKnown RBP11.59□□□□□ -0.55
HMGN1-211ENST00000471260 MRPS11P82912 194 aaKnown RBP11.59□□□□□ -0.55
HMGN1-211ENST00000471260 PRKCDQ05655 676 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 MSMPQ1L6U9 139 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 IFI44LQ53G44 452 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 RGS7BPQ6MZT1 257 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-211ENST00000471260 UNQ6126/PRO20091Q6UXV3 157 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 CXXC5Q7LFL8 322 aaKnown RBP11.59□□□□□ -0.55
HMGN1-211ENST00000471260 VTCN1Q7Z7D3 282 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 CYP4Z1Q86W10 505 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 C1orf174Q8IYL3 243 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 MOSPD2Q8NHP6 518 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 ACOT11Q8WXI4 607 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-211ENST00000471260 YIPF6Q96EC8 236 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 HRASLS5Q96KN8 279 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 C7orf34Q96L11 122 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 RBP7Q96R05 134 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 SYT3Q9BQG1 590 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 RIBC2Q9H4K1 309 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 ANKRD19PQ9H560 264 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 CDH20Q9HBT6 801 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 MAN2C1Q9NTJ4 1040 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 PDP1Q9P0J1 537 aaPredicted RBP11.59□□□□□ -0.55
HMGN1-211ENST00000471260 A3GALT2U3KPV4 340 aa11.59□□□□□ -0.55
HMGN1-211ENST00000471260 IGLV3-9A0A075B6K5 115 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 A6NIZ1 184 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 FFAR1O14842 300 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 SAGP10523 405 aaPredicted RBP11.58□□□□□ -0.56
HMGN1-211ENST00000471260 APLNRP35414 380 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 RANBP1P43487 201 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 UCP2P55851 309 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 CTXN1P60606 82 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 RAP1BP61224 184 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 RAP1AP62834 184 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 HSF2Q03933 536 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 CTF1Q16619 201 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 DGUOKQ16854 277 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 RGS21Q2M5E4 152 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 FAM27BQ5VT28 67 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 UBE2UQ5VVX9 321 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 C16orf87Q6PH81 154 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 OAFQ86UD1 273 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 NRMQ8IXM6 262 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 HS3ST5Q8IZT8 346 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 LRRC18Q8N456 261 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 ATG16L2Q8NAA4 619 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 LRRC75AQ8NAA5 344 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 BPIFB6Q8NFQ5 453 aa11.58□□□□□ -0.56
HMGN1-211ENST00000471260 ZNF519Q8TB69 540 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms