RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 WDYHV1Q96HA8 205 aa16■□□□□ 0.15
SMC4-211ENST00000469858 G6PC2Q9NQR9 355 aa16■□□□□ 0.15
SMC4-211ENST00000469858 EMC3Q9P0I2 261 aa16■□□□□ 0.15
SMC4-211ENST00000469858 AK6Q9Y3D8 172 aaKnown RBP16■□□□□ 0.15
SMC4-211ENST00000469858 MRPL33O75394 65 aaKnown RBP15.99■□□□□ 0.15
SMC4-211ENST00000469858 HSD11B1P28845 292 aa15.99■□□□□ 0.15
SMC4-211ENST00000469858 MZT2AQ6P582 158 aa15.99■□□□□ 0.15
SMC4-211ENST00000469858 LINGO2Q7L985 606 aa15.99■□□□□ 0.15
SMC4-211ENST00000469858 TUSC5Q8IXB3 177 aa15.99■□□□□ 0.15
SMC4-211ENST00000469858 TMEM106AQ96A25 262 aa15.99■□□□□ 0.15
SMC4-211ENST00000469858 CALHM2Q9HA72 323 aa15.99■□□□□ 0.15
SMC4-211ENST00000469858 PNRC2Q9NPJ4 139 aaKnown RBP15.99■□□□□ 0.15
SMC4-211ENST00000469858 WASF3Q9UPY6 502 aa15.99■□□□□ 0.15
SMC4-211ENST00000469858 B3GNT3Q9Y2A9 372 aa15.99■□□□□ 0.15
SMC4-211ENST00000469858 HPGDSO60760 199 aa15.98■□□□□ 0.15
SMC4-211ENST00000469858 IGHV3-9P01782 118 aa15.98■□□□□ 0.15
SMC4-211ENST00000469858 SLC2A2P11168 524 aaPredicted RBP15.98■□□□□ 0.15
SMC4-211ENST00000469858 CPN1P15169 458 aa15.98■□□□□ 0.15
SMC4-211ENST00000469858 PPP3R1P63098 170 aa15.98■□□□□ 0.15
SMC4-211ENST00000469858 MRPS34P82930 218 aaKnown RBP15.98■□□□□ 0.15
SMC4-211ENST00000469858 CEP78Q5JTW2 689 aa15.98■□□□□ 0.15
SMC4-211ENST00000469858 BCL2L15Q5TBC7 163 aa15.98■□□□□ 0.15
SMC4-211ENST00000469858 A0A1B0GVG6 124 aa15.98■□□□□ 0.15
SMC4-211ENST00000469858 ANKRD61A6NGH8 418 aa15.98■□□□□ 0.15
SMC4-211ENST00000469858 MMP16P51512 607 aa15.98■□□□□ 0.15
SMC4-211ENST00000469858 ZNF169Q14929 603 aaPredicted RBP15.98■□□□□ 0.15
SMC4-211ENST00000469858 CEACAM16Q2WEN9 425 aa15.98■□□□□ 0.15
SMC4-211ENST00000469858 CPT1CQ8TCG5 803 aa15.98■□□□□ 0.15
SMC4-211ENST00000469858 ACOT12Q8WYK0 555 aa15.98■□□□□ 0.15
SMC4-211ENST00000469858 DIRAS2Q96HU8 199 aa15.98■□□□□ 0.15
SMC4-211ENST00000469858 TCF7L1Q9HCS4 588 aa15.98■□□□□ 0.15
SMC4-211ENST00000469858 FAM206AQ9NX38 181 aa15.98■□□□□ 0.15
SMC4-211ENST00000469858 V9GYH0 126 aa15.98■□□□□ 0.15
SMC4-211ENST00000469858 TRBV5-7A0A0A0MS05 114 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 NOTOA8MTQ0 251 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 KRT33AO76009 404 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 IGHG3P01860 377 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 DCTDP32321 178 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 THBS2P35442 1172 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 PRKXP51817 358 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 IFITM3Q01628 133 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 RIPPLY2Q5TAB7 128 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 TSPO2Q5TGU0 170 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 RHOUQ7L0Q8 258 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 MCEMP1Q8IX19 187 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 ZNF433Q8N7K0 673 aaPredicted RBP15.97■□□□□ 0.15
SMC4-211ENST00000469858 GJC3Q8NFK1 279 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 SLITRK2Q9H156 845 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 SLCO5A1Q9H2Y9 848 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 BCO1Q9HAY6 547 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 TMEM38BQ9NVV0 291 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 FREM1Q5H8C1 2179 aa15.97■□□□□ 0.15
SMC4-211ENST00000469858 PDCD5O14737 125 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 TBX1O43435 398 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 EPXP11678 715 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 B4GALT1P15291 398 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 NPR2P20594 1047 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 PSMA6P60900 246 aaKnown RBP15.96■□□□□ 0.15
SMC4-211ENST00000469858 RNPS1Q15287 305 aaKnown RBP15.96■□□□□ 0.15
SMC4-211ENST00000469858 FAM27BQ5VT28 67 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 IGFL3Q6UXB1 125 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 ZNF704Q6ZNC4 412 aaPredicted RBP15.96■□□□□ 0.15
SMC4-211ENST00000469858 SPACA3Q8IXA5 215 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 KCTD12Q96CX2 325 aaKnown RBP15.96■□□□□ 0.15
SMC4-211ENST00000469858 SH3GL3Q99963 347 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 NIPAL2Q9H841 368 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 GPR35Q9HC97 309 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 ABCB10Q9NRK6 738 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 PARPBPQ9NWS1 579 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 DHDHQ9UQ10 334 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 SLC5A6Q9Y289 635 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 MSRB2Q9Y3D2 182 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 PCDHGA9Q9Y5G4 932 aaKnown RBP15.96■□□□□ 0.15
SMC4-211ENST00000469858 TRAV8-7A0A075B6U6 113 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 LOC107986453A0A1B0GWG9 222 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 WISP2O76076 250 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 RAF1P04049 648 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 PDGFAP04085 211 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 ATF1P18846 271 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 MADCAM1Q13477 382 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 STAC2Q6ZMT1 411 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 THRSPQ92748 146 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 FBXO17Q96EF6 278 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 GFI1Q99684 422 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 FOXB1Q99853 325 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 PBOV1Q9GZY1 135 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 HHLA2Q9UM44 414 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 N6AMT1Q9Y5N5 214 aa15.96■□□□□ 0.15
SMC4-211ENST00000469858 APC2O95996 2303 aa15.96■□□□□ 0.14
SMC4-211ENST00000469858 ARHGAP21Q5T5U3 1957 aa15.95■□□□□ 0.14
SMC4-211ENST00000469858 SLC22A20A6NK97 555 aa15.95■□□□□ 0.14
SMC4-211ENST00000469858 ZNF724A8MTY0 619 aa15.95■□□□□ 0.14
SMC4-211ENST00000469858 P2RY10O00398 339 aa15.95■□□□□ 0.14
SMC4-211ENST00000469858 UPK1BO75841 260 aa15.95■□□□□ 0.14
SMC4-211ENST00000469858 PAHP00439 452 aa15.95■□□□□ 0.14
SMC4-211ENST00000469858 ISG15P05161 165 aa15.95■□□□□ 0.14
SMC4-211ENST00000469858 UBCP0CG48 685 aaKnown RBP15.95■□□□□ 0.14
SMC4-211ENST00000469858 SLC2A1P11166 492 aa15.95■□□□□ 0.14
SMC4-211ENST00000469858 GALK2Q01415 458 aa15.95■□□□□ 0.14
SMC4-211ENST00000469858 FAM131AQ6UXB0 335 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms