RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 H0YIG0 161 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 LAMTOR5O43504 91 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 GDF9O60383 454 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 THBS1P07996 1170 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 MELTFP08582 738 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 PRF1P14222 555 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 HSD17B7P56937 341 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 OR1Q1Q15612 314 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 D2HGDHQ8N465 521 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 GATSQ8NAP1 163 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 ZSCAN1Q8NBB4 408 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 PAQR8Q8TEZ7 354 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 NRSN2Q9GZP1 204 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 TMEM100Q9NV29 134 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 COMMD9Q9P000 198 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 U3KQA8 63 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 C1orf196B1AJZ1 125 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 WRBO00258 174 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 CLPSP04118 112 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 ANXA2P07355 339 aaKnown RBP12.5□□□□□ -0.41
GPC1-208ENST00000469694 TDGF1P13385 188 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 ZNF44P15621 663 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 ABCD3P28288 659 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 CASRP41180 1078 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 NAA10P41227 235 aaPredicted RBP12.5□□□□□ -0.41
GPC1-208ENST00000469694 INPP5JQ15735 1006 aaPredicted RBP12.5□□□□□ -0.41
GPC1-208ENST00000469694 RNF212Q495C1 297 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 LRRC37A5PQ49AS3 106 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 ZCCHC12Q6PEW1 402 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 SLC35F2Q8IXU6 374 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 SLC38A9Q8NBW4 561 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 SAP25Q8TEE9 199 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 RGP1Q92546 391 aaPredicted RBP12.5□□□□□ -0.41
GPC1-208ENST00000469694 BPIFA2Q96DR5 249 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 SLC41A2Q96JW4 573 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 MNTQ99583 582 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 NCDNQ9UBB6 729 aa12.5□□□□□ -0.41
GPC1-208ENST00000469694 SULT2B1O00204 365 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 TIAF1O95411 115 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 CD3DP04234 171 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 FBP1P09467 338 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 ADRA2CP18825 462 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 PSMD4P55036 377 aaKnown RBP12.49□□□□□ -0.41
GPC1-208ENST00000469694 GUCA2AQ02747 115 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 LTBQ06643 244 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 YOD1Q5VVQ6 348 aaPredicted RBP12.49□□□□□ -0.41
GPC1-208ENST00000469694 LIPNQ5VXI9 398 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 CDK20Q8IZL9 346 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 ZNF615Q8N8J6 731 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 CNN2Q99439 309 aaKnown RBP12.49□□□□□ -0.41
GPC1-208ENST00000469694 LMF2Q9BU23 707 aaKnown RBP12.49□□□□□ -0.41
GPC1-208ENST00000469694 TMEM231Q9H6L2 316 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 FER1L5A0AVI2 2057 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 OR2AT4A6NND4 320 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 TTLL8A6PVC2 850 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 ZFPL1O95159 310 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 ATXN7L3Q14CW9 347 aaPredicted RBP12.49□□□□□ -0.41
GPC1-208ENST00000469694 LPCAT3Q6P1A2 487 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 UNQ6126/PRO20091Q6UXV3 157 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 RANBP3LQ86VV4 465 aaPredicted RBP12.49□□□□□ -0.41
GPC1-208ENST00000469694 PRR22Q8IZ63 422 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 POMGNT2Q8NAT1 580 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 RPS4Y2Q8TD47 263 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 DVL3Q92997 716 aaPredicted RBP12.49□□□□□ -0.41
GPC1-208ENST00000469694 ZNF501Q96CX3 271 aaPredicted RBP12.49□□□□□ -0.41
GPC1-208ENST00000469694 TCF7L1Q9HCS4 588 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 ADAMTS9Q9P2N4 1935 aa12.49□□□□□ -0.41
GPC1-208ENST00000469694 IDSB3KWA1 339 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 LYPD3O95274 346 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 PAX6P26367 422 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 NANOS3P60323 173 aaKnown RBP12.48□□□□□ -0.41
GPC1-208ENST00000469694 CCL7P80098 99 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 FUT7Q11130 342 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 EIPR1Q53HC9 387 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 BCORP1Q8N888 145 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 OR5AP2Q8NGF4 316 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 PPP1R1CQ8WVI7 109 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 HOXB13Q92826 284 aaPredicted RBP12.48□□□□□ -0.41
GPC1-208ENST00000469694 GAL3ST4Q96RP7 486 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 PRMT8Q9NR22 394 aaPredicted RBP12.48□□□□□ -0.41
GPC1-208ENST00000469694 MMP26Q9NRE1 261 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 METTL1Q9UBP6 276 aaKnown RBP12.48□□□□□ -0.41
GPC1-208ENST00000469694 UPB1Q9UBR1 384 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 IGHV3-20A0A0C4DH32 117 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 GGT3PA6NGU5 568 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 C17orf51A8MQB3 221 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 GMFGO60234 142 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 NSDHLQ15738 373 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 ACER2Q5QJU3 275 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 ARHGAP40Q5TG30 622 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 STEAP1BQ6NZ63 245 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 CLEC1AQ8NC01 280 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 OR8S1Q8NH09 359 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 SEC22AQ96IW7 307 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 CHRNA10Q9GZZ6 450 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 Q9N2J8 555 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 RCC2Q9P258 522 aaKnown RBP12.48□□□□□ -0.41
GPC1-208ENST00000469694 PLEKHA6Q9Y2H5 1048 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 MEIS3P1A6NDR6 274 aa12.48□□□□□ -0.41
GPC1-208ENST00000469694 PPT1P50897 306 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms