RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 CSPG4P5Q96PW8 444 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 AZI2Q9H6S1 392 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 NMRAL1Q9HBL8 299 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 CSNK1G1Q9HCP0 422 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 ASF1BQ9NVP2 202 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 RHBDL2Q9NX52 303 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 ST3GAL6Q9Y274 331 aa0.59□□□□□ -2.31
SSB-208ENST00000468600 KIF16BQ96L93 1317 aa0.59□□□□□ -2.32
SSB-208ENST00000468600 PALLDQ8WX93 1383 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 MDN1Q9NU22 5596 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 GPR89AB7ZAQ6 455 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 PRAMEF26H0Y7S4 382 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 DYNC1I1O14576 645 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 DNALI1O14645 258 aaPredicted RBP0.58□□□□□ -2.32
SSB-208ENST00000468600 SEMA3DO95025 777 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 GPR89BP0CG08 455 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 P2RX1P51575 399 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 CDKN2DP55273 166 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 VSX2P58304 361 aaPredicted RBP0.58□□□□□ -2.32
SSB-208ENST00000468600 PPIL2Q13356 520 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 SP6Q3SY56 376 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 USH1GQ495M9 461 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 CPTPQ5TA50 214 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 ZNF470Q6ECI4 717 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 DHDDSQ86SQ9 333 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 ZNF619Q8N2I2 560 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 FAM83FQ8NEG4 500 aaPredicted RBP0.58□□□□□ -2.32
SSB-208ENST00000468600 STMN2Q93045 179 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 DUSP21Q9H596 190 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 KIF3AQ9Y496 699 aa0.58□□□□□ -2.32
SSB-208ENST00000468600 MUC5BQ9HC84 5762 aaPredicted RBP0.58□□□□□ -2.32
SSB-208ENST00000468600 A0A1B0GUH1 482 aa0.57□□□□□ -2.32
SSB-208ENST00000468600 A0A1B0GWJ7 208 aa0.57□□□□□ -2.32
SSB-208ENST00000468600 OR7C2O60412 319 aa0.57□□□□□ -2.32
SSB-208ENST00000468600 DPM1O60762 260 aa0.57□□□□□ -2.32
SSB-208ENST00000468600 KRT8P05787 483 aa0.57□□□□□ -2.32
SSB-208ENST00000468600 EPB41P11171 864 aaKnown RBP0.57□□□□□ -2.32
SSB-208ENST00000468600 ATP6V1C1P21283 382 aa0.57□□□□□ -2.32
SSB-208ENST00000468600 QPRTQ15274 297 aa0.57□□□□□ -2.32
SSB-208ENST00000468600 PDZK1Q5T2W1 519 aa0.57□□□□□ -2.32
SSB-208ENST00000468600 STK40Q8N2I9 435 aa0.57□□□□□ -2.32
SSB-208ENST00000468600 COQ2Q96H96 371 aa0.57□□□□□ -2.32
SSB-208ENST00000468600 PANX2Q96RD6 677 aa0.57□□□□□ -2.32
SSB-208ENST00000468600 SAMD10Q9BYL1 202 aa0.57□□□□□ -2.32
SSB-208ENST00000468600 GCOM2Q9BZD3 368 aaPredicted RBP0.57□□□□□ -2.32
SSB-208ENST00000468600 TRMT112Q9UI30 125 aaKnown RBP0.57□□□□□ -2.32
SSB-208ENST00000468600 AURKCQ9UQB9 309 aa0.57□□□□□ -2.32
SSB-208ENST00000468600 LAMB2P55268 1798 aa0.56□□□□□ -2.32
SSB-208ENST00000468600 IGLV1-36A0A0B4J1U3 117 aa0.56□□□□□ -2.32
SSB-208ENST00000468600 GOLGA8SH3BPF8 625 aa0.56□□□□□ -2.32
SSB-208ENST00000468600 AQP9O43315 295 aa0.56□□□□□ -2.32
SSB-208ENST00000468600 CHMP2AO43633 222 aa0.56□□□□□ -2.32
SSB-208ENST00000468600 IDH1O75874 414 aaKnown RBP0.56□□□□□ -2.32
SSB-208ENST00000468600 ACSM4P0C7M7 580 aa0.56□□□□□ -2.32
SSB-208ENST00000468600 MAPK3P27361 379 aaPredicted RBP0.56□□□□□ -2.32
SSB-208ENST00000468600 CCT3P49368 545 aaKnown RBP0.56□□□□□ -2.32
SSB-208ENST00000468600 UBE2E1P51965 193 aa0.56□□□□□ -2.32
SSB-208ENST00000468600 ARFIP1P53367 373 aa0.56□□□□□ -2.32
SSB-208ENST00000468600 GPX6P59796 221 aa0.56□□□□□ -2.32
SSB-208ENST00000468600 PDK4Q16654 411 aa0.56□□□□□ -2.32
SSB-208ENST00000468600 DEGS2Q6QHC5 323 aa0.56□□□□□ -2.32
SSB-208ENST00000468600 COX18Q8N8Q8 333 aa0.56□□□□□ -2.32
SSB-208ENST00000468600 OR4M1Q8NGD0 313 aa0.56□□□□□ -2.32
SSB-208ENST00000468600 TRIM44Q96DX7 344 aaPredicted RBP0.56□□□□□ -2.32
SSB-208ENST00000468600 COPS8Q99627 209 aa0.56□□□□□ -2.32
SSB-208ENST00000468600 RWDD1Q9H446 243 aaPredicted RBP0.56□□□□□ -2.32
SSB-208ENST00000468600 COQ10BQ9H8M1 238 aa0.56□□□□□ -2.32
SSB-208ENST00000468600 KCNJ16Q9NPI9 418 aa0.56□□□□□ -2.32
SSB-208ENST00000468600 D6RAR5 112 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 CBR1P16152 277 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 ECH1Q13011 328 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 RCAN2Q14206 197 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 ZNF181Q2M3W8 571 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 KLHL12Q53G59 568 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 LRRC74BQ6ZQY2 392 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 Q6ZSA8 131 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 TMPPEQ6ZT21 453 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 EGFL6Q8IUX8 553 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 SLC26A10Q8NG04 563 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 RHEBL1Q8TAI7 183 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 PIBF1Q8WXW3 757 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 DCPSQ96C86 337 aaKnown RBP0.55□□□□□ -2.32
SSB-208ENST00000468600 C10orf35Q96D05 121 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 PLEKHA8Q96JA3 519 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 RNF145Q96MT1 663 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 ANKRD19PQ9H560 264 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 POLE4Q9NR33 117 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 ACTR3BQ9P1U1 418 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 ICE1Q9Y2F5 2266 aa0.55□□□□□ -2.32
SSB-208ENST00000468600 RP1L1Q8IWN7 2480 aaPredicted RBP0.54□□□□□ -2.32
SSB-208ENST00000468600 ZNF816-ZNF321PA0A0X1KG74 233 aa0.54□□□□□ -2.32
SSB-208ENST00000468600 LCA5LO95447 670 aa0.54□□□□□ -2.32
SSB-208ENST00000468600 CPSF4O95639 269 aaKnown RBP0.54□□□□□ -2.32
SSB-208ENST00000468600 MMP7P09237 267 aaPredicted RBP0.54□□□□□ -2.32
SSB-208ENST00000468600 NCF1P14598 390 aaPredicted RBP0.54□□□□□ -2.32
SSB-208ENST00000468600 CSRP1P21291 193 aaKnown RBP0.54□□□□□ -2.32
SSB-208ENST00000468600 ATP6V1E1P36543 226 aa0.54□□□□□ -2.32
SSB-208ENST00000468600 PRR3P79522 188 aaKnown RBP0.54□□□□□ -2.32
SSB-208ENST00000468600 SLC9A3R2Q15599 337 aa0.54□□□□□ -2.32
SSB-208ENST00000468600 RIPPLY2Q5TAB7 128 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms