RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 CLDN18P56856 261 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 IFITM3Q01628 133 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 IL18Q14116 193 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 FAM189A2Q15884 450 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 ZNF79Q15937 498 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 FAM27D1Q5T7N8 215 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 CARD17Q5XLA6 110 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 MZT2BQ6NZ67 158 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 LRRC69Q6ZNQ3 347 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 ABHD12BQ7Z5M8 362 aaPredicted RBP9.02□□□□□ -0.97
MSH5-213ENST00000468136 SAMD12Q8N8I0 201 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 OR13C5Q8NGS8 318 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 ASB5Q8WWX0 329 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 HSD17B8Q92506 261 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 SPTSSAQ969W0 71 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 ZNF385AQ96PM9 386 aaKnown RBP9.02□□□□□ -0.97
MSH5-213ENST00000468136 UCN2Q96RP3 112 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 SDHCQ99643 169 aaPredicted RBP9.02□□□□□ -0.97
MSH5-213ENST00000468136 C7orf50Q9BRJ6 194 aaKnown RBP9.02□□□□□ -0.97
MSH5-213ENST00000468136 COL25A1Q9BXS0 654 aaPredicted RBP9.02□□□□□ -0.97
MSH5-213ENST00000468136 HDHD2Q9H0R4 259 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 ABCG5Q9H222 651 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 ZDHHC11Q9H8X9 412 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 BCO1Q9HAY6 547 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 NEK6Q9HC98 313 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 BRD7Q9NPI1 651 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 GLRX2Q9NS18 164 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 CENPMQ9NSP4 180 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 FAM86C1Q9NVL1 165 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 FAM206AQ9NX38 181 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 EXTL2Q9UBQ6 330 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 CAMK2AQ9UQM7 478 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 EMC9Q9Y3B6 208 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 ZNF175Q9Y473 711 aa9.02□□□□□ -0.97
MSH5-213ENST00000468136 FREM3P0C091 2139 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 A0A0A6YYH2 397 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 TRGV5A0A0B4J1U4 118 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 A0A1B0GVI7 797 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 A6NJ64 397 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 DHRS7CA6NNS2 312 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 RPL36A-HNRNPH2H7BZ11 118 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 NCR1O76036 304 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 MPZL1O95297 269 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 PRKAR1AP10644 381 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 ATF1P18846 271 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 CCL1P22362 96 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 RPS27P42677 84 aaKnown RBP9.01□□□□□ -0.97
MSH5-213ENST00000468136 CAV3P56539 151 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 DBPQ10586 325 aaPredicted RBP9.01□□□□□ -0.97
MSH5-213ENST00000468136 CAMK2BQ13554 666 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 SF3B4Q15427 424 aaKnown RBP eCLIP9.01□□□□□ -0.974e-9■■■■□ 20.4
MSH5-213ENST00000468136 SGCAQ16586 387 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 PGAP1Q75T13 922 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 DOK3Q7L591 496 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.01□□□□□ -0.97
MSH5-213ENST00000468136 LUZP2Q86TE4 346 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 LRRTM1Q86UE6 522 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 NR2C2APQ86WQ0 139 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 LINC00346Q8IVM7 164 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 SERPINA12Q8IW75 414 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 Q8N402 240 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 OR52H1Q8NGJ2 320 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 PTX4Q96A99 478 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 S100A16Q96FQ6 103 aaKnown RBP9.01□□□□□ -0.97
MSH5-213ENST00000468136 SMAD5Q99717 465 aaKnown RBP9.01□□□□□ -0.97
MSH5-213ENST00000468136 RBM24Q9BX46 236 aaKnown RBP9.01□□□□□ -0.97
MSH5-213ENST00000468136 PRRG4Q9BZD6 226 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 PBOV1Q9GZY1 135 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 SLC22A4Q9H015 551 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 OCEL1Q9H607 264 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 PLA2G3Q9NZ20 509 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 ASH2LQ9UBL3 628 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 STEAP1Q9UHE8 339 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 SLC22A13Q9Y226 551 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 AK6Q9Y3D8 172 aaKnown RBP9.01□□□□□ -0.97
MSH5-213ENST00000468136 EP300Q09472 2414 aaPredicted RBP9.01□□□□□ -0.97
MSH5-213ENST00000468136 EML6Q6ZMW3 1958 aa9.01□□□□□ -0.97
MSH5-213ENST00000468136 PCSK5Q92824 1860 aa9□□□□□ -0.97
MSH5-213ENST00000468136 VCANP13611 3396 aa9□□□□□ -0.97
MSH5-213ENST00000468136 A0A0U1RQV5 110 aa9□□□□□ -0.97
MSH5-213ENST00000468136 LOC107986453A0A1B0GWG9 222 aa9□□□□□ -0.97
MSH5-213ENST00000468136 SLC17A2O00624 439 aa9□□□□□ -0.97
MSH5-213ENST00000468136 NKX2-8O15522 239 aa9□□□□□ -0.97
MSH5-213ENST00000468136 SYT7O43581 403 aa9□□□□□ -0.97
MSH5-213ENST00000468136 GSTZ1O43708 216 aaPredicted RBP9□□□□□ -0.97
MSH5-213ENST00000468136 MRPL33O75394 65 aaKnown RBP9□□□□□ -0.97
MSH5-213ENST00000468136 SCGNO76038 276 aa9□□□□□ -0.97
MSH5-213ENST00000468136 ALX3O95076 343 aa9□□□□□ -0.97
MSH5-213ENST00000468136 PNPP00491 289 aa9□□□□□ -0.97
MSH5-213ENST00000468136 IGHG3P01860 377 aa9□□□□□ -0.97
MSH5-213ENST00000468136 ITGB2P05107 769 aa9□□□□□ -0.97
MSH5-213ENST00000468136 PSKH1P11801 424 aa9□□□□□ -0.97
MSH5-213ENST00000468136 IGFBP3P17936 291 aaPredicted RBP9□□□□□ -0.97
MSH5-213ENST00000468136 ELK1P19419 428 aa9□□□□□ -0.97
MSH5-213ENST00000468136 OTX1P32242 354 aaPredicted RBP9□□□□□ -0.97
MSH5-213ENST00000468136 MAGEA5P43359 124 aa9□□□□□ -0.97
MSH5-213ENST00000468136 SELENOPP49908 381 aa9□□□□□ -0.97
MSH5-213ENST00000468136 MMP15P51511 669 aa9□□□□□ -0.97
MSH5-213ENST00000468136 ART1P52961 327 aa9□□□□□ -0.97
MSH5-213ENST00000468136 OR10A3P58181 314 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms