RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 RAB35Q15286 201 aa11.72□□□□□ -0.53
SSBP1-206ENST00000467681 RSPO1Q2MKA7 263 aaPredicted RBP11.72□□□□□ -0.53
SSBP1-206ENST00000467681 ELFN2Q5R3F8 820 aa11.72□□□□□ -0.53
SSBP1-206ENST00000467681 SHEQ5VZ18 495 aa11.72□□□□□ -0.53
SSBP1-206ENST00000467681 LYPD4Q6UWN0 246 aa11.72□□□□□ -0.53
SSBP1-206ENST00000467681 PRSS57Q6UWY2 283 aa11.72□□□□□ -0.53
SSBP1-206ENST00000467681 UNQ6126/PRO20091Q6UXV3 157 aa11.72□□□□□ -0.53
SSBP1-206ENST00000467681 SPNS3Q6ZMD2 512 aa11.72□□□□□ -0.53
SSBP1-206ENST00000467681 LINC00346Q8IVM7 164 aa11.72□□□□□ -0.53
SSBP1-206ENST00000467681 CBR4Q8N4T8 237 aa11.72□□□□□ -0.53
SSBP1-206ENST00000467681 STMN2Q93045 179 aa11.72□□□□□ -0.53
SSBP1-206ENST00000467681 MRPL24Q96A35 216 aaKnown RBP11.72□□□□□ -0.53
SSBP1-206ENST00000467681 PERPQ96FX8 193 aa11.72□□□□□ -0.53
SSBP1-206ENST00000467681 C4orf45Q96LM5 186 aa11.72□□□□□ -0.53
SSBP1-206ENST00000467681 OR51V1Q9H2C8 321 aa11.72□□□□□ -0.53
SSBP1-206ENST00000467681 WDR76Q9H967 626 aa11.72□□□□□ -0.53
SSBP1-206ENST00000467681 MARCH7Q9H992 704 aa11.72□□□□□ -0.53
SSBP1-206ENST00000467681 HINT3Q9NQE9 182 aaKnown RBP11.72□□□□□ -0.53
SSBP1-206ENST00000467681 ATPIF1Q9UII2 106 aa11.72□□□□□ -0.53
SSBP1-206ENST00000467681 GDF2Q9UK05 429 aaPredicted RBP11.72□□□□□ -0.53
SSBP1-206ENST00000467681 PMF1-BGLAPU3KQ54 211 aa11.72□□□□□ -0.53
SSBP1-206ENST00000467681 ACANP16112 2415 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 MED13LQ71F56 2210 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 TLX2O43763 284 aaPredicted RBP11.71□□□□□ -0.53
SSBP1-206ENST00000467681 PRKYO43930 277 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 NGFP01138 241 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 GSTT1P30711 240 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 CDKN1AP38936 164 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 ENTPD1P49961 510 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 ALDH3A2P51648 485 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 ADAM8P78325 824 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 ECH1Q13011 328 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 KRTAP27-1Q3LI81 207 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 C12orf73Q69YU5 71 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 RGS7BPQ6MZT1 257 aaPredicted RBP11.71□□□□□ -0.53
SSBP1-206ENST00000467681 ARL9Q6T311 187 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 ZBTB49Q6ZSB9 765 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 C1orf174Q8IYL3 243 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 ZNF101Q8IZC7 436 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 OR6K6Q8NGW6 343 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 DCLRE1CQ96SD1 692 aaKnown RBP11.71□□□□□ -0.53
SSBP1-206ENST00000467681 PITX2Q99697 317 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 COQ7Q99807 217 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 SLC29A1Q99808 456 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 C9orf16Q9BUW7 83 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 CACNG6Q9BXT2 260 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 GABARAPL3Q9BY60 117 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 HDHD2Q9H0R4 259 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 ELOVL3Q9HB03 270 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 TBCCD1Q9NVR7 557 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 FBXO9Q9UK97 447 aaPredicted RBP11.71□□□□□ -0.53
SSBP1-206ENST00000467681 GRIP1Q9Y3R0 1128 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 COMMD3-BMI1R4GMX3 469 aa11.71□□□□□ -0.53
SSBP1-206ENST00000467681 LRBAP50851 2863 aa11.71□□□□□ -0.54
SSBP1-206ENST00000467681 CSPG4Q6UVK1 2322 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 H7C417 338 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 EI24O14681 340 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 PRODHO43272 600 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 LCKP06239 509 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 ZNF250P15622 560 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 SLC2A5P22732 501 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 TUBG1P23258 451 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 SNRPD2P62316 118 aaKnown RBP11.7□□□□□ -0.54
SSBP1-206ENST00000467681 SLC35D3Q5M8T2 416 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 CFAP77Q6ZQR2 320 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 CXXC5Q7LFL8 322 aaKnown RBP11.7□□□□□ -0.54
SSBP1-206ENST00000467681 LRP11Q86VZ4 500 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 KRTAP1-3Q8IUG1 177 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 TCEANCQ8N8B7 351 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 BBS1Q8NFJ9 593 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 OR1J1Q8NGS3 322 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 IPCEF1Q8WWN9 437 aaPredicted RBP11.7□□□□□ -0.54
SSBP1-206ENST00000467681 SLC7A6Q92536 515 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 MARS2Q96GW9 593 aaKnown RBP11.7□□□□□ -0.54
SSBP1-206ENST00000467681 MAP6Q96JE9 813 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 PRRG3Q9BZD7 231 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 MRPL37Q9BZE1 423 aaKnown RBP11.7□□□□□ -0.54
SSBP1-206ENST00000467681 OR51B6Q9H340 312 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 RIBC2Q9H4K1 309 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 PNRC2Q9NPJ4 139 aaKnown RBP11.7□□□□□ -0.54
SSBP1-206ENST00000467681 TUBG2Q9NRH3 451 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 DUSP13Q9UII6 198 aa11.7□□□□□ -0.54
SSBP1-206ENST00000467681 E9PQ18 207 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 NDUFS7O75251 213 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 ABHD16AO95870 558 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 DBHP09172 617 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 SPARCP09486 303 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 PSKH1P11801 424 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 RPS27P42677 84 aaKnown RBP11.69□□□□□ -0.54
SSBP1-206ENST00000467681 RAD23AP54725 363 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 SELENOVP59797 346 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 ERVS71-1P61550 626 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 PPP1CBP62140 327 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 ZNF718Q3SXZ3 478 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 KLHL12Q53G59 568 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 AADACL4Q5VUY2 407 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 TMEM154Q6P9G4 183 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 TIGD4Q8IY51 512 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 OR10S1Q8NGN2 331 aa11.69□□□□□ -0.54
SSBP1-206ENST00000467681 ABHD4Q8TB40 342 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms