RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 OR2V1Q8NHB1 315 aa12.46□□□□□ -0.42
BRAT1-203ENST00000467558 AKIP1Q9NQ31 210 aa12.46□□□□□ -0.42
BRAT1-203ENST00000467558 D6RAR5 112 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 ZNF133P52736 654 aaPredicted RBP12.45□□□□□ -0.42
BRAT1-203ENST00000467558 BTG1P62324 171 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 TBC1D28Q2M2D7 210 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 SFTPA2Q8IWL1 248 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 M0R036 132 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 FOXS1O43638 330 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 TIMM8AO60220 97 aaPredicted RBP12.45□□□□□ -0.42
BRAT1-203ENST00000467558 GALP22466 123 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 RBP2P50120 134 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 CCR6P51684 374 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 OR10A3P58181 314 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 SHBQ15464 509 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 TM4SF19Q96DZ7 209 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 SLIRPQ9GZT3 109 aaKnown RBP12.45□□□□□ -0.42
BRAT1-203ENST00000467558 OR14J1Q9UGF5 321 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 GDF2Q9UK05 429 aaPredicted RBP12.45□□□□□ -0.42
BRAT1-203ENST00000467558 PIKFYVEQ9Y2I7 2098 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 SCN3AQ9NY46 2000 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 LPLP06858 475 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 SLC37A1P57057 533 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 RNF128Q8TEB7 428 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 APH1BQ8WW43 257 aa12.45□□□□□ -0.42
BRAT1-203ENST00000467558 RBM38Q9H0Z9 239 aaKnown RBP12.45□□□□□ -0.42
BRAT1-203ENST00000467558 FITM1A5D6W6 292 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 TNFSF11O14788 317 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 GUSBP08236 651 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 OR8U9P0C7N5 309 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 TAS2R20P59543 309 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 SSPNQ14714 243 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 FAM27D1Q5T7N8 215 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 COL13A1Q5TAT6 717 aaPredicted RBP12.44□□□□□ -0.42
BRAT1-203ENST00000467558 CCDC28AQ8IWP9 274 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 OR52I2Q8NH67 350 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 CPNE4Q96A23 557 aaPredicted RBP12.44□□□□□ -0.42
BRAT1-203ENST00000467558 GNRHR2Q96P88 292 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 IGHV3-15A0A0B4J1V0 119 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 OR6C68A6NDL8 312 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 C4orf47A7E2U8 309 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 SPDEFO95238 335 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 WNT11O96014 354 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 HOXB5P09067 269 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 EPXP11678 715 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 ZNF546Q86UE3 836 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 C10orf90Q96M02 699 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 PBOV1Q9GZY1 135 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 EXOGQ9Y2C4 368 aaKnown RBP12.44□□□□□ -0.42
BRAT1-203ENST00000467558 A0A1W2PQD3 144 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 M0R296 226 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 ZNF616Q08AN1 781 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 ZXDCQ2QGD7 858 aaPredicted RBP12.44□□□□□ -0.42
BRAT1-203ENST00000467558 ACER2Q5QJU3 275 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 C16orf47Q6ZP98 133 aaPredicted RBP12.44□□□□□ -0.42
BRAT1-203ENST00000467558 GDPD3Q7L5L3 318 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 OR2Y1Q8NGV0 311 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 OR1S1Q8NH92 325 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 GCDHQ92947 438 aaPredicted RBP12.44□□□□□ -0.42
BRAT1-203ENST00000467558 DOK1Q99704 481 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 FAM173AQ9BQD7 235 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 MLXQ9UH92 298 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 EXO1Q9UQ84 846 aaKnown RBP12.44□□□□□ -0.42
BRAT1-203ENST00000467558 R4GN57 208 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 TCRBV16S1A1N1A0A5B0 115 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 RFC3P40938 356 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 DUSP2Q05923 314 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 FAPQ12884 760 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 SLC9A3R2Q15599 337 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.44□□□□□ -0.42
BRAT1-203ENST00000467558 OTPQ5XKR4 325 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 ZNF585AQ6P3V2 769 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 NOXO1Q8NFA2 376 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 C11orf40Q8WZ69 217 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 DVL3Q92997 716 aaPredicted RBP12.44□□□□□ -0.42
BRAT1-203ENST00000467558 PELI1Q96FA3 418 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 HINT2Q9BX68 163 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 FSCN3Q9NQT6 498 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 GLTPQ9NZD2 209 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 FBXL4Q9UKA2 621 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 PILRAQ9UKJ1 303 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 NUP50Q9UKX7 468 aa12.44□□□□□ -0.42
BRAT1-203ENST00000467558 M0QYG6 137 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 PLPP2O43688 288 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 SERPINA7P05543 415 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 PCMT1P22061 227 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 SPEM2Q0P670 501 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 ZNF169Q14929 603 aaPredicted RBP12.43□□□□□ -0.42
BRAT1-203ENST00000467558 KCNJ8Q15842 424 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 TMEM52Q8NDY8 209 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 SMOC1Q9H4F8 434 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 BCO1Q9HAY6 547 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 B3GAT1Q9P2W7 334 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 SLC22A23A1A5C7 686 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 SHISA8B8ZZ34 492 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 BET1O15155 118 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 TRAPPC2P0DI81 140 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 TRAPPC2BP0DI82 140 aa12.43□□□□□ -0.42
BRAT1-203ENST00000467558 ARR3P36575 388 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms