RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	GRB2	P62993	217 aa	Known RBP	10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	PPP3R1	P63098	170 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	RIPPLY2	Q5TAB7	128 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	LINGO2	Q7L985	606 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	SPACA3	Q8IXA5	215 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	TUSC5	Q8IXB3	177 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	LRRC18	Q8N456	261 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	PARP16	Q8N5Y8	322 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	OR51A4	Q8NGJ6	313 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	ACOT12	Q8WYK0	555 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	PPP1R14A	Q96A00	147 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	ORAI1	Q96D31	301 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	ZNF837	Q96EG3	531 aa	Predicted RBP	10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	LINC00470	Q9BZP3	86 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	SLITRK2	Q9H156	845 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	MIXL1	Q9H2W2	232 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	NIPAL2	Q9H841	368 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	MOB1A	Q9H8S9	216 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	CALHM2	Q9HA72	323 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	GPR35	Q9HC97	309 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	COMMD3	Q9UBI1	195 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	DAPK2	Q9UIK4	370 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	CLEC4A	Q9UMR7	237 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	B3GNT3	Q9Y2A9	372 aa		10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	RIF1	Q5UIP0	2472 aa	Known RBP	10.84	□□□□□ -0.67
HDLBP-231	ENST00000467435	CEP250	Q9BV73	2442 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	ZNF407	Q9C0G0	2248 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	LOC107986453	A0A1B0GWG9	222 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	SLC22A20	A6NK97	555 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	NOTO	A8MTQ0	251 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	AQP7	O14520	342 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	PDGFA	P04085	211 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	UBC	P0CG48	685 aa	Known RBP	10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	FCGR2A	P12318	317 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	B4GALT1	P15291	398 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	SRM	P19623	302 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	THBS2	P35442	1172 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	CX3CR1	P49238	355 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	MMP16	P51512	607 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	CEACAM16	Q2WEN9	425 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	SLC25A35	Q3KQZ1	300 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	CEP78	Q5JTW2	689 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	TSPO2	Q5TGU0	170 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	FAM27B	Q5VT28	67 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	ZNF704	Q6ZNC4	412 aa	Predicted RBP	10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	RHOU	Q7L0Q8	258 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	SYT9	Q86SS6	491 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	GJC3	Q8NFK1	279 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	TMEM106A	Q96A25	262 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	KCTD12	Q96CX2	325 aa	Known RBP	10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	FOXB1	Q99853	325 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	PRDM14	Q9GZV8	571 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	TCF7L1	Q9HCS4	588 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	BRD7	Q9NPI1	651 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	DDX28	Q9NUL7	540 aa	Known RBP	10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	PARPBP	Q9NWS1	579 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	ADAM30	Q9UKF2	790 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	DHDH	Q9UQ10	334 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	SSUH2	Q9Y2M2	353 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	AK6	Q9Y3D8	172 aa	Known RBP	10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	ZNF175	Q9Y473	711 aa		10.83	□□□□□ -0.68
HDLBP-231	ENST00000467435	ARPC4-TTLL3	A0A0A6YYG9	625 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435		A0A1B0GVC2	190 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	OR6C65	A6NJZ3	312 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	P2RY10	O00398	339 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	DOK2	O60496	412 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	HPGDS	O60760	199 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	IGHV3-9	P01782	118 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	TTR	P02766	147 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	RAF1	P04049	648 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	ISG15	P05161	165 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	YES1	P07947	543 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	CST2	P09228	141 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	SLC2A2	P11168	524 aa	Predicted RBP	10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	ATF1	P18846	271 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	PRKX	P51817	358 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	HIST1H3A	P68431	136 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	HIST2H3PS2	Q5TEC6	136 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	TMEM244	Q5VVB8	128 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	STAC2	Q6ZMT1	411 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435		Q6ZS92	163 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	HIST2H3A	Q71DI3	136 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	P4HA3	Q7Z4N8	544 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	APH1A	Q96BI3	265 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	FBXO17	Q96EF6	278 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	PBOV1	Q9GZY1	135 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	NUFIP1	Q9UHK0	495 aa	Known RBP	10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	HHLA2	Q9UM44	414 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435		V9GYH0	126 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	CNTRL	Q7Z7A1	2325 aa		10.82	□□□□□ -0.68
HDLBP-231	ENST00000467435	TRAV8-7	A0A075B6U6	113 aa		10.81	□□□□□ -0.68
HDLBP-231	ENST00000467435	ANKRD61	A6NGH8	418 aa		10.81	□□□□□ -0.68
HDLBP-231	ENST00000467435	ZNF587B	E7ETH6	402 aa		10.81	□□□□□ -0.68
HDLBP-231	ENST00000467435	MKRN2OS	H3BPM6	223 aa		10.81	□□□□□ -0.68
HDLBP-231	ENST00000467435	TBX1	O43435	398 aa		10.81	□□□□□ -0.68
HDLBP-231	ENST00000467435	SLC19A2	O60779	497 aa		10.81	□□□□□ -0.68
HDLBP-231	ENST00000467435	TGM6	O95932	706 aa		10.81	□□□□□ -0.68
HDLBP-231	ENST00000467435	CD2	P06729	351 aa		10.81	□□□□□ -0.68
HDLBP-231	ENST00000467435	EPX	P11678	715 aa		10.81	□□□□□ -0.68
HDLBP-231	ENST00000467435	AGTR1	P30556	359 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms