RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 UBLCP1Q8WVY7 318 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-207ENST00000467273 ST8SIA1Q92185 356 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 EXOSC8Q96B26 276 aaKnown RBP4.6□□□□□ -1.67
PTCD3-207ENST00000467273 ELP4Q96EB1 424 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 SH3YL1Q96HL8 342 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-207ENST00000467273 C1orf147Q96MC9 270 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-207ENST00000467273 OR5B2Q96R09 309 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 CPNE1Q99829 537 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 SSX3Q99909 188 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 C9orf16Q9BUW7 83 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 FAM192AQ9GZU8 254 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 CAB39LQ9H9S4 337 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 VPS29Q9UBQ0 182 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 OPN4Q9UHM6 478 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 TMCO1Q9UM00 188 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 ICAM5Q9UMF0 924 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 CHMP2BQ9UQN3 213 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 SLC9A8Q9Y2E8 581 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 MRPS7Q9Y2R9 242 aaKnown RBP4.6□□□□□ -1.67
PTCD3-207ENST00000467273 SPIN1Q9Y657 262 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-207ENST00000467273 SIRT4Q9Y6E7 314 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-207ENST00000467273 GNG14A0A1W2PPG7 69 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 ELOVL7A1L3X0 281 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 PRR23D1E9PI22 279 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-207ENST00000467273 LYNX1G3V0Z9 82 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 SULT2B1O00204 365 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 OR7A17O14581 309 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 PPIHO43447 177 aaKnown RBP4.59□□□□□ -1.67
PTCD3-207ENST00000467273 PCDH7O60245 1069 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 EIF4E2O60573 245 aaKnown RBP4.59□□□□□ -1.67
PTCD3-207ENST00000467273 EIF1BO60739 113 aaKnown RBP4.59□□□□□ -1.67
PTCD3-207ENST00000467273 BANF1O75531 89 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 SCGB2A1O75556 95 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 RP2O75695 350 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 JTBO76095 146 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 KCNK2O95069 426 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 CH25HO95992 272 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 NGFP01138 241 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 CRYGCP07315 174 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 IL3P08700 152 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 CECR9P0C854 216 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 ZCCHC18P0CG32 403 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 PRR23D2P0DMB1 279 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-207ENST00000467273 LYNX1P0DP58 116 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 AREGP15514 252 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 GABRB1P18505 474 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 NTSP30990 170 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 RRM2P31350 389 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 SPRP35270 261 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-207ENST00000467273 ATP4BP51164 291 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 NCBP2P52298 156 aaKnown RBP eCLIP4.59□□□□□ -1.67
PTCD3-207ENST00000467273 UBE2NP61088 152 aaKnown RBP4.59□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF117Q03924 483 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 TRAF3Q13114 568 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 SLC9A3R2Q15599 337 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 CD226Q15762 336 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 C2orf68Q2NKX9 166 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 SYT14P1Q58G82 188 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 ARMCX4Q5H9R4 360 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 OLFML2AQ68BL7 652 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 ASPHD2Q6ICH7 369 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 TMEM107Q6UX40 140 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 CASP12Q6UXS9 341 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 C9orf139Q6ZV77 190 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 NANOGNBQ7Z5D8 188 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 AMIGO2Q86SJ2 522 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 CCDC36Q8IYA8 594 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 ZCCHC24Q8N2G6 241 aaKnown RBP4.59□□□□□ -1.67
PTCD3-207ENST00000467273 C1orf52Q8N6N3 182 aaKnown RBP4.59□□□□□ -1.67
PTCD3-207ENST00000467273 GATSQ8NAP1 163 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 OR52E4Q8NGH9 312 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 OR5W2Q8NH69 310 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 FAM110DQ8TAY7 271 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-207ENST00000467273 GPR119Q8TDV5 335 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 SELENOMQ8WWX9 145 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 TMEM234Q8WY98 164 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 GTF3AQ92664 365 aaKnown RBP4.59□□□□□ -1.67
PTCD3-207ENST00000467273 TMEM45BQ96B21 275 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 RASD2Q96D21 266 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 PGAM5Q96HS1 289 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 TRNT1Q96Q11 434 aaKnown RBP4.59□□□□□ -1.67
PTCD3-207ENST00000467273 NUAK2Q9H093 628 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 NOL11Q9H8H0 719 aaKnown RBP4.59□□□□□ -1.67
PTCD3-207ENST00000467273 ANKZF1Q9H8Y5 726 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 FN3KRPQ9HA64 309 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 SLC7A10Q9NS82 523 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF275Q9NSD4 429 aaPredicted RBP4.59□□□□□ -1.67
PTCD3-207ENST00000467273 TMEM45AQ9NWC5 275 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 GIN1Q9NXP7 522 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 GRHL1Q9NZI5 618 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF346Q9UL40 294 aaKnown RBP4.59□□□□□ -1.67
PTCD3-207ENST00000467273 TRAPPC4Q9Y296 219 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 HDGFL3Q9Y3E1 203 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 ADAM18Q9Y3Q7 739 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 CMAHPQ9Y471 501 aa4.59□□□□□ -1.67
PTCD3-207ENST00000467273 CMYA5Q8N3K9 4069 aa4.59□□□□□ -1.68
PTCD3-207ENST00000467273 TRBV2A0A0J9YWF9 115 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 SH3PXD2BA1X283 911 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 CLPSL1A2RUU4 121 aa4.58□□□□□ -1.68
PTCD3-207ENST00000467273 CFAP73A6NFT4 308 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms