RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 FAM46BQ96A09 425 aa13.97□□□□□ -0.17
CHD1L-205ENST00000467213 CMSS1Q9BQ75 279 aaKnown RBP13.97□□□□□ -0.17
CHD1L-205ENST00000467213 KCNK15Q9H427 330 aa13.97□□□□□ -0.17
CHD1L-205ENST00000467213 TREM1Q9NP99 234 aa13.97□□□□□ -0.17
CHD1L-205ENST00000467213 TAS2R4Q9NYW5 299 aa13.97□□□□□ -0.17
CHD1L-205ENST00000467213 MRPS33Q9Y291 106 aaKnown RBP13.97□□□□□ -0.17
CHD1L-205ENST00000467213 R4GMQ9 66 aa13.97□□□□□ -0.17
CHD1L-205ENST00000467213 IGLV1-36A0A0B4J1U3 117 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 APBB3O95704 486 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 PNPP00491 289 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 PLGP00747 810 aaPredicted RBP13.96□□□□□ -0.17
CHD1L-205ENST00000467213 BGLAPP02818 100 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 ERCC1P07992 297 aaPredicted RBP13.96□□□□□ -0.17
CHD1L-205ENST00000467213 PET100P0DJ07 73 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 HSD11B1P28845 292 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 HABP2Q14520 560 aaPredicted RBP13.96□□□□□ -0.17
CHD1L-205ENST00000467213 VAX1Q5SQQ9 334 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 FAM109BQ6ICB4 259 aaPredicted RBP13.96□□□□□ -0.17
CHD1L-205ENST00000467213 FJX1Q86VR8 437 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 SLC25A44Q96H78 314 aaPredicted RBP13.96□□□□□ -0.17
CHD1L-205ENST00000467213 SYT4Q9H2B2 425 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 RHOFQ9HBH0 211 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 TMED7Q9Y3B3 224 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 CPAMD8Q8IZJ3 1885 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 F13BP05160 661 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 S100A9P06702 114 aaKnown RBP13.96□□□□□ -0.17
CHD1L-205ENST00000467213 KCNJ3P48549 501 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 QRFPP83859 136 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 NFATC4Q14934 902 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 SMAD2Q15796 467 aaKnown RBP13.96□□□□□ -0.17
CHD1L-205ENST00000467213 GFOD2Q3B7J2 385 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 FAM78AQ5JUQ0 283 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 TMEM244Q5VVB8 128 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 TMEM200AQ86VY9 491 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 TMEFF1Q8IYR6 380 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 C10orf53Q8N6V4 93 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 FRMD1Q8N878 549 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 ZNF615Q8N8J6 731 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 SPACA7Q96KW9 195 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 SCGB3A2Q96PL1 93 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 TAAR9Q96RI9 348 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 PARP11Q9NR21 331 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 SLC22A11Q9NSA0 550 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 METTL1Q9UBP6 276 aaKnown RBP13.96□□□□□ -0.17
CHD1L-205ENST00000467213 FARSAQ9Y285 508 aaKnown RBP13.96□□□□□ -0.17
CHD1L-205ENST00000467213 TIMM10BQ9Y5J6 103 aa13.96□□□□□ -0.17
CHD1L-205ENST00000467213 PRSS37A4D1T9 235 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 XKRYO14609 159 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 PTGFRP43088 359 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 SRSF3P84103 164 aaKnown RBP13.95□□□□□ -0.18
CHD1L-205ENST00000467213 PCK2Q16822 640 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 COL13A1Q5TAT6 717 aaPredicted RBP13.95□□□□□ -0.18
CHD1L-205ENST00000467213 TRAPPC6BQ86SZ2 158 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 ZNF561Q8N587 486 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 ARRDC1Q8N5I2 433 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 COMMD1Q8N668 190 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 ZSCAN4Q8NAM6 433 aaPredicted RBP13.95□□□□□ -0.18
CHD1L-205ENST00000467213 TCEAL3Q969E4 200 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 LAT2Q9GZY6 243 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 FBRSQ9HAH7 460 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 SLC22A13Q9Y226 551 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 DTX4Q9Y2E6 619 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 ZNF264O43296 627 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 FBXO24O75426 580 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 IL33O95760 270 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 FCGR3AP08637 254 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 FBXO45P0C2W1 286 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 RNH1P13489 461 aaKnown RBP13.95□□□□□ -0.18
CHD1L-205ENST00000467213 AGAP20933 346 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 AVPR2P30518 371 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 SERPINF1P36955 418 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 TOMM34Q15785 309 aaPredicted RBP13.95□□□□□ -0.18
CHD1L-205ENST00000467213 OR52N5Q8NH56 324 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 OR1E3Q8WZA6 343 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 ELSPBP1Q96BH3 223 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 ARL5BQ96KC2 179 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 KPTNQ9Y664 436 aa13.95□□□□□ -0.18
CHD1L-205ENST00000467213 LAMA2P24043 3122 aaKnown RBP13.95□□□□□ -0.18
CHD1L-205ENST00000467213 TMEM235A6NFC5 223 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 C1orf196B1AJZ1 125 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 FAM157AC9JC47 383 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 RNASEK-C17orf49H0YIS7 233 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 FABP1P07148 127 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 RCC1P18754 421 aaPredicted RBP13.94□□□□□ -0.18
CHD1L-205ENST00000467213 CD1CP29017 333 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 RPL27P61353 136 aaKnown RBP13.94□□□□□ -0.18
CHD1L-205ENST00000467213 ATXN7L3Q14CW9 347 aaPredicted RBP13.94□□□□□ -0.18
CHD1L-205ENST00000467213 SGCBQ16585 318 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 MOGAT2Q3SYC2 334 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 BTNL8Q6UX41 500 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 ANGPTL5Q86XS5 388 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 KDM8Q8N371 416 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 ZSCAN1Q8NBB4 408 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 C16orf52Q8NHV5 167 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 CMKLR1Q99788 373 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 KXD1Q9BQD3 176 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 SELENOIQ9C0D9 397 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 OR10A5Q9H207 317 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 OR51M1Q9H341 326 aa13.94□□□□□ -0.18
CHD1L-205ENST00000467213 MRPL22Q9NWU5 206 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms