RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 CLCF1Q9UBD9 225 aa8.4□□□□□ -1.06
SRPRB-202ENST00000466636 CRNNQ9UBG3 495 aaPredicted RBP8.4□□□□□ -1.06
SRPRB-202ENST00000466636 CLEC4AQ9UMR7 237 aa8.4□□□□□ -1.06
SRPRB-202ENST00000466636 EMC9Q9Y3B6 208 aa8.4□□□□□ -1.06
SRPRB-202ENST00000466636 PEX16Q9Y5Y5 336 aa8.4□□□□□ -1.06
SRPRB-202ENST00000466636 DOCK10Q96BY6 2186 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 ARPC4-TTLL3A0A0A6YYG9 625 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 A0A1W2PPK0 400 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 ACOD1A6NK06 481 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 SLC22A20A6NK97 555 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 LOC110117498-PIK3R3F6TDL0 507 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 RPL36A-HNRNPH2H7BZ11 118 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 CTDSP2O14595 271 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 RRP8O43159 456 aaKnown RBP8.39□□□□□ -1.07
SRPRB-202ENST00000466636 MRPL33O75394 65 aaKnown RBP8.39□□□□□ -1.07
SRPRB-202ENST00000466636 YES1P07947 543 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 CST2P09228 141 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 FCGR2AP12318 317 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 NPR2P20594 1047 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 CTSSP25774 331 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 GUCA1AP43080 201 aaPredicted RBP8.39□□□□□ -1.07
SRPRB-202ENST00000466636 MAGEB1P43366 347 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 PSMA6P60900 246 aaKnown RBP8.39□□□□□ -1.07
SRPRB-202ENST00000466636 DCTN2Q13561 401 aaKnown RBP8.39□□□□□ -1.07
SRPRB-202ENST00000466636 ZNF846Q147U1 533 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 INAQ16352 499 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 CEACAM16Q2WEN9 425 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 Q499Y3 187 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 HSD17B12Q53GQ0 312 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 CCDC92Q53HC0 331 aaPredicted RBP8.39□□□□□ -1.07
SRPRB-202ENST00000466636 CEP78Q5JTW2 689 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 CCDC190Q86UF4 302 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 MCEMP1Q8IX19 187 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 RDH10Q8IZV5 341 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 ZNF676Q8N7Q3 588 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 GPR148Q8TDV2 347 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 S100ZQ8WXG8 99 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 BORCS5Q969J3 196 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 PPP1R14AQ96A00 147 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 SARAFQ96BY9 339 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 FOXB1Q99853 325 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 ATF6BQ99941 703 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 WDR12Q9GZL7 423 aaKnown RBP8.39□□□□□ -1.07
SRPRB-202ENST00000466636 NIPAL2Q9H841 368 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 CALHM2Q9HA72 323 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 GP6Q9HCN6 339 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 HMG20AQ9NP66 347 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 SLC7A10Q9NS82 523 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 DDX28Q9NUL7 540 aaKnown RBP8.39□□□□□ -1.07
SRPRB-202ENST00000466636 OR52A1Q9UKL2 312 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 NCKAP5O14513 1909 aa8.39□□□□□ -1.07
SRPRB-202ENST00000466636 MPDZO75970 2070 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 TMEM269A0A1B0GVZ9 245 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 OR6C65A6NJZ3 312 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 J3QRK9 145 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 TAF4O00268 1085 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 ISG15P05161 165 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 ACHEP22303 614 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 MAPK3P27361 379 aaPredicted RBP8.38□□□□□ -1.07
SRPRB-202ENST00000466636 AGTR1P30556 359 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 TNFSF8P32971 234 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 S100A5P33763 92 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 THBS2P35442 1172 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 ETV6P41212 452 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 SOX2P48431 317 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 OR10A3P58181 314 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 GRB2P62993 217 aaKnown RBP8.38□□□□□ -1.07
SRPRB-202ENST00000466636 PLEKHN1Q494U1 663 aaPredicted RBP8.38□□□□□ -1.07
SRPRB-202ENST00000466636 NRN1LQ496H8 165 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 BCL2L15Q5TBC7 163 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 KLHL24Q6TFL4 600 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 NUFIP2Q7Z417 695 aaKnown RBP8.38□□□□□ -1.07
SRPRB-202ENST00000466636 BTLAQ7Z6A9 289 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 FGD2Q7Z6J4 655 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 SYT9Q86SS6 491 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.38□□□□□ -1.07
SRPRB-202ENST00000466636 ELMOD2Q8IZ81 293 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 GJC3Q8NFK1 279 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 OR51A4Q8NGJ6 313 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 AP3S1Q92572 193 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 APH1AQ96BI3 265 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 ORAI1Q96D31 301 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 FBXO17Q96EF6 278 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 WDFY2Q96P53 400 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 GFI1Q99684 422 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 MIXL1Q9H2W2 232 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 ZCCHC4Q9H5U6 513 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 MOB1AQ9H8S9 216 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 NUFIP1Q9UHK0 495 aaKnown RBP8.38□□□□□ -1.07
SRPRB-202ENST00000466636 GTF2A1LQ9UNN4 478 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 B3GNT3Q9Y2A9 372 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 CMAHPQ9Y471 501 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 CFAP54Q96N23 3096 aa8.38□□□□□ -1.07
SRPRB-202ENST00000466636 DMXL1Q9Y485 3027 aa8.37□□□□□ -1.07
SRPRB-202ENST00000466636 CNOT1A5YKK6 2376 aaKnown RBP8.37□□□□□ -1.07
SRPRB-202ENST00000466636 EML6Q6ZMW3 1958 aa8.37□□□□□ -1.07
SRPRB-202ENST00000466636 MED13Q9UHV7 2174 aa8.37□□□□□ -1.07
SRPRB-202ENST00000466636 LOC107986453A0A1B0GWG9 222 aa8.37□□□□□ -1.07
SRPRB-202ENST00000466636 OR14I1A6ND48 311 aa8.37□□□□□ -1.07
SRPRB-202ENST00000466636 ANKRD61A6NGH8 418 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms