RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 FANCMQ8IYD8 2048 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 GNRH1P01148 92 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 ZNF806P0C7X5 589 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 LYL1P12980 280 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 NFYBP25208 207 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 SERPINF1P36955 418 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 SNRPEP62304 92 aaKnown RBP17.73■□□□□ 0.43
SDF4-205ENST00000465727 TCEA2Q15560 299 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 TRAPPC6BQ86SZ2 158 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 CATSPERDQ86XM0 798 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 BCORP1Q8N888 145 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 SPACA7Q96KW9 195 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 RNF126Q9BV68 326 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 TBX21Q9UL17 535 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 RAB22AQ9UL26 194 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 NOSIPQ9Y314 301 aaKnown RBP17.73■□□□□ 0.43
SDF4-205ENST00000465727 POMT1Q9Y6A1 747 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 SCGNO76038 276 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 FARS2O95363 451 aaKnown RBP17.73■□□□□ 0.43
SDF4-205ENST00000465727 PNPP00491 289 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 CT45A8P0DMV1 189 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 CT45A9P0DMV2 189 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 MUC1P15941 1255 aaPredicted RBP17.73■□□□□ 0.43
SDF4-205ENST00000465727 RIDAP52758 137 aaKnown RBP17.73■□□□□ 0.43
SDF4-205ENST00000465727 EGR4Q05215 589 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 SMCO1Q147U7 214 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 CT45A2Q5DJT8 189 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 ZSCAN4Q8NAM6 433 aaPredicted RBP17.73■□□□□ 0.43
SDF4-205ENST00000465727 DTWD2Q8NBA8 298 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 BAHD1Q8TBE0 780 aaPredicted RBP17.73■□□□□ 0.43
SDF4-205ENST00000465727 GAL3ST1Q99999 423 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 GSN-AS1Q9NRJ2 163 aa17.73■□□□□ 0.43
SDF4-205ENST00000465727 CGGBP1Q9UFW8 167 aaPredicted RBP17.73■□□□□ 0.43
SDF4-205ENST00000465727 A0A1W2PQU0 124 aa17.72■□□□□ 0.43
SDF4-205ENST00000465727 FITM1A5D6W6 292 aa17.72■□□□□ 0.43
SDF4-205ENST00000465727 XKRYO14609 159 aa17.72■□□□□ 0.43
SDF4-205ENST00000465727 ABCD3P28288 659 aa17.72■□□□□ 0.43
SDF4-205ENST00000465727 IGSF11Q5DX21 431 aa17.72■□□□□ 0.43
SDF4-205ENST00000465727 CSNK1A1LQ8N752 337 aa17.72■□□□□ 0.43
SDF4-205ENST00000465727 AQP10Q96PS8 301 aa17.72■□□□□ 0.43
SDF4-205ENST00000465727 SLC22A11Q9NSA0 550 aa17.72■□□□□ 0.43
SDF4-205ENST00000465727 DPP7Q9UHL4 492 aa17.72■□□□□ 0.43
SDF4-205ENST00000465727 GDF2Q9UK05 429 aaPredicted RBP17.72■□□□□ 0.43
SDF4-205ENST00000465727 HHLA2Q9UM44 414 aa17.72■□□□□ 0.43
SDF4-205ENST00000465727 TBC1D3DA0A087WVF3 549 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 C13orf42A0A1B0GVH6 325 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 TBC1D3LB9A6J9 549 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 RNASEK-C17orf49H0YIS7 233 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 MFNGO00587 321 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 HLA-DQA2P01906 255 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 S100A6P06703 90 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 SFTA3P0C7M3 94 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 TBC1D3HP0C7X1 549 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 AKR1C4P17516 323 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 DNASE1L1P49184 302 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 TBC1D3CQ6IPX1 549 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 PRSS54Q6PEW0 395 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 SLC35D2Q76EJ3 337 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 TBC1D3Q8IZP1 549 aaPredicted RBP17.71■□□□□ 0.43
SDF4-205ENST00000465727 JAGN1Q8N5M9 183 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 OR10G6Q8NH81 332 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 MICU1Q9BPX6 476 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 ASH2LQ9UBL3 628 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 LOC100509620A0A075B734 347 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 DCDC2BA2VCK2 349 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 RAB27BO00194 218 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 OR2T1O43869 369 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 IFNA6P05013 189 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 FNDC7Q5VTL7 733 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 ZNF585AQ6P3V2 769 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 ACBD4Q8NC06 268 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 FAM46BQ96A09 425 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 RRNAD1Q96FB5 475 aaKnown RBP17.71■□□□□ 0.43
SDF4-205ENST00000465727 ARL5BQ96KC2 179 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 NKX3-1Q99801 234 aaPredicted RBP17.71■□□□□ 0.43
SDF4-205ENST00000465727 HRH4Q9H3N8 390 aa17.71■□□□□ 0.43
SDF4-205ENST00000465727 SEBOXQ9HB31 216 aaPredicted RBP17.71■□□□□ 0.43
SDF4-205ENST00000465727 MRPS33Q9Y291 106 aaKnown RBP17.71■□□□□ 0.43
SDF4-205ENST00000465727 EIF1BO60739 113 aaKnown RBP17.7■□□□□ 0.42
SDF4-205ENST00000465727 GPANK1O95872 356 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 CD5P06127 495 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 EIF1P41567 113 aaKnown RBP17.7■□□□□ 0.42
SDF4-205ENST00000465727 GSK3AP49840 483 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 SKP2Q13309 424 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 HMGN3Q15651 99 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 SGCAQ16586 387 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 EIF2S3LQ2VIR3 472 aaKnown RBP17.7■□□□□ 0.42
SDF4-205ENST00000465727 TMEM128Q5BJH2 165 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 LYPD6Q86Y78 171 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 ZNF561Q8N587 486 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 ADAD2Q8NCV1 583 aaKnown RBP17.7■□□□□ 0.42
SDF4-205ENST00000465727 NUDT16L1Q9BRJ7 211 aaKnown RBP17.7■□□□□ 0.42
SDF4-205ENST00000465727 OR51M1Q9H341 326 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 RAB18Q9NP72 206 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 B9D1Q9UPM9 204 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 YKT6O15498 198 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 KCNAB3O43448 404 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 MBTPS2O43462 519 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 OR6A2O95222 327 aa17.7■□□□□ 0.42
SDF4-205ENST00000465727 ISG15P05161 165 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms