RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 KHDRBS3O75525 346 aaKnown RBP17.6■□□□□ 0.41
CSPG5-204ENST00000465441 FOXH1O75593 365 aa17.6■□□□□ 0.41
CSPG5-204ENST00000465441 NDUFB2O95178 105 aa17.6■□□□□ 0.41
CSPG5-204ENST00000465441 COMPP49747 757 aaPredicted RBP17.6■□□□□ 0.41
CSPG5-204ENST00000465441 CCDC92Q53HC0 331 aaPredicted RBP17.6■□□□□ 0.41
CSPG5-204ENST00000465441 C1orf94Q6P1W5 598 aa17.6■□□□□ 0.41
CSPG5-204ENST00000465441 GCDHQ92947 438 aaPredicted RBP17.6■□□□□ 0.41
CSPG5-204ENST00000465441 SLC6A7Q99884 636 aa17.6■□□□□ 0.41
CSPG5-204ENST00000465441 SYT4Q9H2B2 425 aa17.6■□□□□ 0.41
CSPG5-204ENST00000465441 MMP26Q9NRE1 261 aa17.6■□□□□ 0.41
CSPG5-204ENST00000465441 TANC2Q9HCD6 1990 aa17.59■□□□□ 0.41
CSPG5-204ENST00000465441 H1F0P07305 194 aaKnown RBP17.59■□□□□ 0.41
CSPG5-204ENST00000465441 TNFRSF1AP19438 455 aa17.59■□□□□ 0.41
CSPG5-204ENST00000465441 TNFSF4P23510 183 aa17.59■□□□□ 0.41
CSPG5-204ENST00000465441 SDHAP31040 664 aa17.59■□□□□ 0.41
CSPG5-204ENST00000465441 OMPP47874 163 aa17.59■□□□□ 0.41
CSPG5-204ENST00000465441 LIMS1P48059 325 aa17.59■□□□□ 0.41
CSPG5-204ENST00000465441 LSM6P62312 80 aaKnown RBP17.59■□□□□ 0.41
CSPG5-204ENST00000465441 AQP6Q13520 282 aa17.59■□□□□ 0.41
CSPG5-204ENST00000465441 KRR1Q13601 381 aaKnown RBP17.59■□□□□ 0.41
CSPG5-204ENST00000465441 HACD2Q6Y1H2 254 aa17.59■□□□□ 0.41
CSPG5-204ENST00000465441 LRRC28Q86X40 367 aaPredicted RBP17.59■□□□□ 0.41
CSPG5-204ENST00000465441 ZNF283Q8N7M2 679 aa17.59■□□□□ 0.41
CSPG5-204ENST00000465441 ITLN1Q8WWA0 313 aa17.59■□□□□ 0.41
CSPG5-204ENST00000465441 C22orf15Q8WYQ4 148 aa17.59■□□□□ 0.41
CSPG5-204ENST00000465441 RBM4Q9BWF3 364 aaKnown RBP17.59■□□□□ 0.41
CSPG5-204ENST00000465441 PLA2G12AQ9BZM1 189 aa17.59■□□□□ 0.41
CSPG5-204ENST00000465441 NDEL1Q9GZM8 345 aa17.59■□□□□ 0.41
CSPG5-204ENST00000465441 PATZ1Q9HBE1 687 aaKnown RBP17.59■□□□□ 0.41
CSPG5-204ENST00000465441 IL19Q9UHD0 177 aa17.59■□□□□ 0.41
CSPG5-204ENST00000465441 IL20RAQ9UHF4 553 aa17.59■□□□□ 0.41
CSPG5-204ENST00000465441 IER3IP1Q9Y5U9 82 aa17.59■□□□□ 0.41
CSPG5-204ENST00000465441 PPIAL4EA0A075B759 164 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 PPIAL4CA0A0B4J2A2 164 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 A0A1W2PRQ8 180 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 PPIAL4DF5H284 164 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 FSHBP01225 129 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 PPIAL4FP0DN26 164 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 ERFP50548 548 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 FXYD6P3P58550 94 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 DGCR6Q14129 220 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 GPR139Q6DWJ6 353 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 GLYATQ6IB77 296 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 PTCHD4Q6ZW05 846 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 GLB1L2Q8IW92 636 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 BPIFB2Q8N4F0 458 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 ZDHHC22Q8N966 263 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 OR1F12Q8NHA8 337 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 GPX7Q96SL4 187 aaPredicted RBP17.58■□□□□ 0.4
CSPG5-204ENST00000465441 KCTD14Q9BQ13 255 aaPredicted RBP17.58■□□□□ 0.4
CSPG5-204ENST00000465441 NUAK2Q9H093 628 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 ESM1Q9NQ30 184 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 VSX1Q9NZR4 365 aaPredicted RBP17.58■□□□□ 0.4
CSPG5-204ENST00000465441 NDUFAF4Q9P032 175 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 ASH2LQ9UBL3 628 aa17.58■□□□□ 0.4
CSPG5-204ENST00000465441 FAM32AQ9Y421 112 aaKnown RBP17.58■□□□□ 0.4
CSPG5-204ENST00000465441 OR6C6A6NF89 314 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 TRAPPC2LH3BP13 241 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 SOCS2O14508 198 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 NDUFAB1O14561 156 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 RER1O15258 196 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 DBHP09172 617 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 RHCEP18577 417 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 FPR2P25090 351 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 CDKN2AP42771 156 aaKnown RBP17.57■□□□□ 0.4
CSPG5-204ENST00000465441 SLC6A9P48067 706 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 NUDT2P50583 147 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 TMEM155Q4W5P6 130 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 OR5AS1Q8N127 324 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 SPICQ8N5J4 248 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 DVL3Q92997 716 aaPredicted RBP17.57■□□□□ 0.4
CSPG5-204ENST00000465441 C7orf34Q96L11 122 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 COG8Q96MW5 612 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 SIGLEC11Q96RL6 698 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 RPS6KA6Q9UK32 745 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 PPP1R3CQ9UQK1 317 aa17.57■□□□□ 0.4
CSPG5-204ENST00000465441 NBEAL1Q6ZS30 2694 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 TRBV4-1A0A0J9YWV2 114 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 DIRAS1O95057 198 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 GPANK1O95872 356 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 RAC2P15153 192 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 MDH1P40925 334 aaKnown RBP17.56■□□□□ 0.4
CSPG5-204ENST00000465441 PSME3P61289 254 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 SEC61A1P61619 476 aaKnown RBP17.56■□□□□ 0.4
CSPG5-204ENST00000465441 SEC23BQ15437 767 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 KCNMB1Q16558 191 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 FGD3Q5JSP0 725 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 DPY19L2P2Q6ZN68 376 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 KLHL36Q8N4N3 616 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 C3orf56Q8N813 242 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 ATG16L2Q8NAA4 619 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 DEFB108BQ8NET1 73 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 RSRC1Q96IZ7 334 aaKnown RBP17.56■□□□□ 0.4
CSPG5-204ENST00000465441 OR2V2Q96R30 315 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 GPA33Q99795 319 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 ABCD2Q9UBJ2 740 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 AURKCQ9UQB9 309 aa17.56■□□□□ 0.4
CSPG5-204ENST00000465441 POLR3KQ9Y2Y1 108 aaPredicted RBP17.56■□□□□ 0.4
CSPG5-204ENST00000465441 UNC119BA6NIH7 251 aa17.55■□□□□ 0.4
CSPG5-204ENST00000465441 SURF4O15260 269 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms