RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 CDKN2AP42771 156 aaKnown RBP15.97■□□□□ 0.15
SF3A1-205ENST00000463818 FXYD6P3P58550 94 aa15.97■□□□□ 0.15
SF3A1-205ENST00000463818 LSM6P62312 80 aaKnown RBP15.97■□□□□ 0.15
SF3A1-205ENST00000463818 TNFAIP6P98066 277 aaPredicted RBP15.97■□□□□ 0.15
SF3A1-205ENST00000463818 AQP6Q13520 282 aa15.97■□□□□ 0.15
SF3A1-205ENST00000463818 ZMAT1Q5H9K5 638 aa15.97■□□□□ 0.15
SF3A1-205ENST00000463818 C1orf229Q6ZS94 237 aaPredicted RBP15.97■□□□□ 0.15
SF3A1-205ENST00000463818 PTCHD4Q6ZW05 846 aa15.97■□□□□ 0.15
SF3A1-205ENST00000463818 GLB1L2Q8IW92 636 aa15.97■□□□□ 0.15
SF3A1-205ENST00000463818 NPEPL1Q8NDH3 523 aa15.97■□□□□ 0.15
SF3A1-205ENST00000463818 SLC7A6Q92536 515 aa15.97■□□□□ 0.15
SF3A1-205ENST00000463818 DHRS1Q96LJ7 313 aa15.97■□□□□ 0.15
SF3A1-205ENST00000463818 FUZQ9BT04 418 aa15.97■□□□□ 0.15
SF3A1-205ENST00000463818 NUAK2Q9H093 628 aa15.97■□□□□ 0.15
SF3A1-205ENST00000463818 GORASP2Q9H8Y8 452 aa15.97■□□□□ 0.15
SF3A1-205ENST00000463818 PURGQ9UJV8 347 aaKnown RBP15.97■□□□□ 0.15
SF3A1-205ENST00000463818 DCTN3O75935 186 aa15.96■□□□□ 0.15
SF3A1-205ENST00000463818 VENTXO95231 258 aa15.96■□□□□ 0.15
SF3A1-205ENST00000463818 TXNDC12O95881 172 aa15.96■□□□□ 0.15
SF3A1-205ENST00000463818 RPS6KA3P51812 740 aa15.96■□□□□ 0.15
SF3A1-205ENST00000463818 CCDC92Q53HC0 331 aaPredicted RBP15.96■□□□□ 0.15
SF3A1-205ENST00000463818 C1orf94Q6P1W5 598 aa15.96■□□□□ 0.15
SF3A1-205ENST00000463818 ZNF771Q7L3S4 317 aaPredicted RBP15.96■□□□□ 0.15
SF3A1-205ENST00000463818 PEG10Q86TG7 708 aaKnown RBP15.96■□□□□ 0.15
SF3A1-205ENST00000463818 OR1F12Q8NHA8 337 aa15.96■□□□□ 0.15
SF3A1-205ENST00000463818 PTP4A1Q93096 173 aa15.96■□□□□ 0.15
SF3A1-205ENST00000463818 HAVCR1Q96D42 359 aa15.96■□□□□ 0.15
SF3A1-205ENST00000463818 PYURFQ96I23 114 aa15.96■□□□□ 0.15
SF3A1-205ENST00000463818 GAL3ST1Q99999 423 aa15.96■□□□□ 0.15
SF3A1-205ENST00000463818 KRCC1Q9NPI7 259 aaPredicted RBP15.96■□□□□ 0.15
SF3A1-205ENST00000463818 ASH2LQ9UBL3 628 aa15.96■□□□□ 0.15
SF3A1-205ENST00000463818 V9GYQ6 96 aa15.96■□□□□ 0.15
SF3A1-205ENST00000463818 LOC105371242A0A075B767 164 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 A0A0A6YYJ9 748 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 A0A0G2JMP0 313 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 A0A0X1KG70 313 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 ISPDA4D126 451 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 KITLGP21583 273 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 CENPAP49450 140 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 SMIM11AP58511 58 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 HNRNPA0Q13151 305 aaKnown RBP15.95■□□□□ 0.14
SF3A1-205ENST00000463818 SCGB2A2Q13296 93 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 KCNMB1Q16558 191 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 SMARCD3Q6STE5 483 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 Q6ZR03 302 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 ADCK1Q86TW2 530 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 OR4M2Q8NGB6 313 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 COG8Q96MW5 612 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 TSSK2Q96PF2 358 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 DCLRE1CQ96SD1 692 aaKnown RBP15.95■□□□□ 0.14
SF3A1-205ENST00000463818 TMPRSS13Q9BYE2 586 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 DCAF16Q9NXF7 216 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 UBAP1Q9NZ09 502 aa15.95■□□□□ 0.14
SF3A1-205ENST00000463818 OR6C6A6NF89 314 aa15.94■□□□□ 0.14
SF3A1-205ENST00000463818 RER1O15258 196 aa15.94■□□□□ 0.14
SF3A1-205ENST00000463818 GPANK1O95872 356 aa15.94■□□□□ 0.14
SF3A1-205ENST00000463818 DBHP09172 617 aa15.94■□□□□ 0.14
SF3A1-205ENST00000463818 SBK2P0C263 348 aa15.94■□□□□ 0.14
SF3A1-205ENST00000463818 TNFSF4P23510 183 aa15.94■□□□□ 0.14
SF3A1-205ENST00000463818 RBMXP38159 391 aaKnown RBP15.94■□□□□ 0.14
SF3A1-205ENST00000463818 RFX4Q33E94 735 aa15.94■□□□□ 0.14
SF3A1-205ENST00000463818 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.94■□□□□ 0.14
SF3A1-205ENST00000463818 TEX29Q8N6K0 151 aa15.94■□□□□ 0.14
SF3A1-205ENST00000463818 OR2Z1Q8NG97 314 aa15.94■□□□□ 0.14
SF3A1-205ENST00000463818 SAMD8Q96LT4 415 aa15.94■□□□□ 0.14
SF3A1-205ENST00000463818 ERMAPQ96PL5 475 aaPredicted RBP15.94■□□□□ 0.14
SF3A1-205ENST00000463818 SRA1Q9HD15 236 aaKnown RBP15.94■□□□□ 0.14
SF3A1-205ENST00000463818 TMEM106BQ9NUM4 274 aa15.94■□□□□ 0.14
SF3A1-205ENST00000463818 B9D1Q9UPM9 204 aa15.94■□□□□ 0.14
SF3A1-205ENST00000463818 NPTNQ9Y639 398 aa15.94■□□□□ 0.14
SF3A1-205ENST00000463818 DCTN6O00399 190 aa15.93■□□□□ 0.14
SF3A1-205ENST00000463818 GADD45GO95257 159 aa15.93■□□□□ 0.14
SF3A1-205ENST00000463818 PPP1R3DO95685 299 aa15.93■□□□□ 0.14
SF3A1-205ENST00000463818 SEMG1P04279 462 aa15.93■□□□□ 0.14
SF3A1-205ENST00000463818 HSD17B1P14061 328 aa15.93■□□□□ 0.14
SF3A1-205ENST00000463818 CRABP1P29762 137 aa15.93■□□□□ 0.14
SF3A1-205ENST00000463818 MSX2P35548 267 aaPredicted RBP15.93■□□□□ 0.14
SF3A1-205ENST00000463818 SPIBQ01892 262 aa15.93■□□□□ 0.14
SF3A1-205ENST00000463818 MEP1BQ16820 701 aa15.93■□□□□ 0.14
SF3A1-205ENST00000463818 DCAF12L2Q5VW00 463 aa15.93■□□□□ 0.14
SF3A1-205ENST00000463818 ZNF418Q8TF45 676 aaPredicted RBP15.93■□□□□ 0.14
SF3A1-205ENST00000463818 CDRT15Q96T59 188 aa15.93■□□□□ 0.14
SF3A1-205ENST00000463818 CD300AQ9UGN4 299 aa15.93■□□□□ 0.14
SF3A1-205ENST00000463818 POLR1DQ9Y2S0 133 aa15.93■□□□□ 0.14
SF3A1-205ENST00000463818 J3QLI3 93 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 RGS9O75916 674 aaPredicted RBP15.92■□□□□ 0.14
SF3A1-205ENST00000463818 RAC2P15153 192 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 TNFRSF1AP19438 455 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 ERFP50548 548 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 HIST1H3AP68431 136 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 LCN2P80188 198 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 HIST2H3PS2Q5TEC6 136 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 LEG1Q6P5S2 330 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 DNM1P34Q6PK57 102 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 HIST2H3AQ71DI3 136 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 OR5AS1Q8N127 324 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.92■□□□□ 0.14
SF3A1-205ENST00000463818 GJC3Q8NFK1 279 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 OR5L1Q8NGL2 311 aa15.92■□□□□ 0.14
SF3A1-205ENST00000463818 ST7LQ8TDW4 575 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms