RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 SFXN2Q96NB2 322 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 ZFP64Q9NPA5 681 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 PNRC2Q9NPJ4 139 aaKnown RBP11.34□□□□□ -0.59
VAPB-203ENST00000463370 NCKAP5O14513 1909 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 CXCL13O43927 109 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 PRKAR1AP10644 381 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 SLC2A1P11166 492 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 CNR1P21554 472 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 BTCP35070 178 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 CSNK1A1P48729 337 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 MMP16P51512 607 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 EFNB2P52799 333 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 ABHD17BQ5VST6 288 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 DEGS2Q6QHC5 323 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 PLXDC2Q6UX71 529 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 KRT74Q7RTS7 529 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 HDDC2Q7Z4H3 204 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 BIVMQ86UB2 503 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 IL22RA1Q8N6P7 574 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 OR6N1Q8NGY5 312 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 ROBO4Q8WZ75 1007 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 ADGRG7Q96K78 797 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 SOX7Q9BT81 388 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 FAM86C1Q9NVL1 165 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 CAMK2AQ9UQM7 478 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 N6AMT1Q9Y5N5 214 aa11.34□□□□□ -0.59
VAPB-203ENST00000463370 TTRP02766 147 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 ACSM4P0C7M7 580 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 FTH1P19P0C7X4 201 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 EIF2B2P49770 351 aaKnown RBP11.33□□□□□ -0.6
VAPB-203ENST00000463370 MMP15P51511 669 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 GFRA1P56159 465 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 RAC3P60763 192 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 SRSF6Q13247 344 aaKnown RBP11.33□□□□□ -0.6
VAPB-203ENST00000463370 POU4F3Q15319 338 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 SGCAQ16586 387 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 BCL2L15Q5TBC7 163 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 AKAP14Q86UN6 197 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 OR51D1Q8NGF3 324 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 OR13C3Q8NGS6 347 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 TMEM54Q969K7 222 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 ZNF845Q96IR2 970 aaPredicted RBP11.33□□□□□ -0.6
VAPB-203ENST00000463370 ZNF416Q9BWM5 594 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 RNF121Q9H920 327 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 FOXJ3Q9UPW0 622 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 DOCK10Q96BY6 2186 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 ZNF292O60281 2723 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 FAM240BA0A1B0GVZ2 78 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 ISG15P05161 165 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 CALCBP10092 127 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 IGFBP3P17936 291 aaPredicted RBP11.33□□□□□ -0.6
VAPB-203ENST00000463370 CDK2P24941 298 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 PRKXP51817 358 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 CARD18P57730 90 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 GABREP78334 506 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 TCF15Q12870 199 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 OR1C1Q15619 314 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 JMJD6Q6NYC1 403 aaPredicted RBP11.33□□□□□ -0.6
VAPB-203ENST00000463370 GLRX5Q86SX6 157 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 DUSP18Q8NEJ0 188 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 OR2M7Q8NG81 312 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 OR10D3Q8NH80 312 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 ZC3HAV1LQ96H79 300 aaKnown RBP11.33□□□□□ -0.6
VAPB-203ENST00000463370 NAA11Q9BSU3 229 aaPredicted RBP11.33□□□□□ -0.6
VAPB-203ENST00000463370 PBOV1Q9GZY1 135 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 ABCG5Q9H222 651 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 ZNF319Q9P2F9 582 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 CGGBP1Q9UFW8 167 aaPredicted RBP11.33□□□□□ -0.6
VAPB-203ENST00000463370 STEAP1Q9UHE8 339 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 FOXD3Q9UJU5 478 aaPredicted RBP11.33□□□□□ -0.6
VAPB-203ENST00000463370 HHLA2Q9UM44 414 aa11.33□□□□□ -0.6
VAPB-203ENST00000463370 C5orf63A6NC05 138 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 GJE1A6NN92 205 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 VAMP5O95183 116 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 ACHEP22303 614 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 NR4A2P43354 598 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 PTH2RP49190 550 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 KCNMB1Q16558 191 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 ZNF544Q6NX49 715 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 LINGO2Q7L985 606 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 SULF2Q8IWU5 870 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 OR2AJ1Q8NGZ0 328 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 NABP1Q96AH0 204 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 UTP23Q9BRU9 249 aaKnown RBP11.32□□□□□ -0.6
VAPB-203ENST00000463370 A6NL46 340 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 ZNF716A6NP11 495 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 A8MV72 311 aaPredicted RBP11.32□□□□□ -0.6
VAPB-203ENST00000463370 ZNF878C9JN71 531 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 E9PLN8 166 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 TLX3O43711 291 aaPredicted RBP11.32□□□□□ -0.6
VAPB-203ENST00000463370 POU3F2P20265 443 aaPredicted RBP11.32□□□□□ -0.6
VAPB-203ENST00000463370 RAB25P57735 213 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 SPOCK1Q08629 439 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 MZT2BQ6NZ67 158 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 PLET1Q6UQ28 207 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.32□□□□□ -0.6
VAPB-203ENST00000463370 SIAH3Q8IW03 269 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 ELMOD2Q8IZ81 293 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 LRRC18Q8N456 261 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 KCNE4Q8WWG9 221 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms