RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 CSN2P05814 226 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 POU3F2P20265 443 aaPredicted RBP15.13■□□□□ 0.01
ACTB-207ENST00000462494 ACHEP22303 614 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 S100A11P31949 105 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 PTGS2P35354 604 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 GNALP38405 381 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 APOBEC1P41238 236 aaKnown RBP15.13■□□□□ 0.01
ACTB-207ENST00000462494 SSBP1Q04837 148 aaKnown RBP15.13■□□□□ 0.01
ACTB-207ENST00000462494 TOMM20Q15388 145 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 ZNF704Q6ZNC4 412 aaPredicted RBP15.13■□□□□ 0.01
ACTB-207ENST00000462494 OR4D6Q8NGJ1 314 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 MARVELD3Q96A59 401 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 POTEKPQ9BYX7 375 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 ARL6Q9H0F7 186 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 PCED1AQ9H1Q7 454 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 CHST11Q9NPF2 352 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 ARPC4-TTLL3A0A0A6YYG9 625 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 TRBV11-1A0A0K0K1C0 115 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 GABRA1P14867 456 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 AFF3P51826 1226 aaKnown RBP15.13■□□□□ 0.01
ACTB-207ENST00000462494 BIDP55957 195 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 ZP4Q12836 540 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 SMAD4Q13485 552 aaKnown RBP15.13■□□□□ 0.01
ACTB-207ENST00000462494 HLXQ14774 488 aaPredicted RBP15.13■□□□□ 0.01
ACTB-207ENST00000462494 MFSD13AQ14CX5 517 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 SCGB2B2Q4G0G5 96 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 NHLRC3Q5JS37 347 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 WDR74Q6RFH5 385 aaPredicted RBP15.13■□□□□ 0.01
ACTB-207ENST00000462494 TMUB2Q71RG4 321 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 TMPRSS9Q7Z410 1059 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 KMT5CQ86Y97 462 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 OR10H5Q8NGA6 315 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 FGGYQ96C11 551 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 ZNF768Q9H5H4 540 aaKnown RBP15.13■□□□□ 0.01
ACTB-207ENST00000462494 SEMA5BQ9P283 1151 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 UPB1Q9UBR1 384 aa15.13■□□□□ 0.01
ACTB-207ENST00000462494 TMEM82A0PJX8 343 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 TMEM235A6NFC5 223 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 VSTM2BA6NLU5 285 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 SULT1C2O00338 296 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 SMAD9O15198 467 aaKnown RBP15.12■□□□□ 0.01
ACTB-207ENST00000462494 ALOX12BO75342 701 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 ISG15P05161 165 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 ZNF28P17035 718 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 TMEM244Q5VVB8 128 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 ALKAL2Q6UX46 152 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.12■□□□□ 0.01
ACTB-207ENST00000462494 TMEM229BQ8NBD8 167 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 HRH3Q9Y5N1 445 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 ZNF736B4DX44 427 aaPredicted RBP15.12■□□□□ 0.01
ACTB-207ENST00000462494 RP2O75695 350 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 AQP8O94778 261 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 TIAF1O95411 115 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 ITGB2P05107 769 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 OR4E1P0C645 316 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 GIMD1P0DJR0 217 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 SMAD2Q15796 467 aaKnown RBP15.12■□□□□ 0.01
ACTB-207ENST00000462494 B3GNTL1Q67FW5 361 aaPredicted RBP15.12■□□□□ 0.01
ACTB-207ENST00000462494 RHBDD2Q6NTF9 364 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 TDHQ8IZJ6 230 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 COQ8AQ8NI60 647 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 CCDC107Q8WV48 283 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 CHRDQ9H2X0 955 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 TMEM185BQ9H7F4 350 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 SRPK3Q9UPE1 567 aa15.12■□□□□ 0.01
ACTB-207ENST00000462494 MRPS17Q9Y2R5 130 aaKnown RBP15.12■□□□□ 0.01
ACTB-207ENST00000462494 CEP192Q8TEP8 1941 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 POM121CA8CG34 1229 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 UBCP0CG48 685 aaKnown RBP15.11■□□□□ 0.01
ACTB-207ENST00000462494 SORDQ00796 357 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 NKPD1Q17RQ9 610 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 NKAIN1Q4KMZ8 207 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 PAPD4Q6PIY7 484 aaKnown RBP15.11■□□□□ 0.01
ACTB-207ENST00000462494 NFAM1Q8NET5 270 aaPredicted RBP15.11■□□□□ 0.01
ACTB-207ENST00000462494 OR4S1Q8NGB4 309 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 C11orf40Q8WZ69 217 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 FAM46BQ96A09 425 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 SLAMF6Q96DU3 332 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 OR6C1Q96RD1 312 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 C1QTNF6Q9BXI9 259 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 TGIF2Q9GZN2 237 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 SCPEP1Q9HB40 452 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 PPP4R1LQ9P1A2 415 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 KIF25Q9UIL4 384 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 KLK13Q9UKR3 277 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 HMSDA8MTL9 139 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 SNAPC5O75971 98 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 ACSM4P0C7M7 580 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 GMFBP60983 142 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 PCK2Q16822 640 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 FAM69BQ5VUD6 431 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 KLHL24Q6TFL4 600 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 BPIFB2Q8N4F0 458 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 OR6S1Q8NH40 331 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 DHRS9Q9BPW9 319 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 CNTD2Q9H8S5 307 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 COQ3Q9NZJ6 369 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 KCNN3Q9UGI6 736 aa15.11■□□□□ 0.01
ACTB-207ENST00000462494 LOC100509620A0A075B734 347 aa15.1■□□□□ 0.01
ACTB-207ENST00000462494 CPED1A4D0V7 1026 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms