RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 PDK3Q15120 406 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 GGTA1PQ4G0N0 100 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 FBXW9Q5XUX1 488 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 PAGE2Q7Z2X7 111 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 OR2L13Q8N349 312 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 C17orf78Q8N4C9 275 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 TEX9Q8N6V9 391 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 OR4C3Q8NH37 302 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 CLDND2Q8NHS1 167 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 VANGL1Q8TAA9 524 aaPredicted RBP3.99□□□□□ -1.77
COPS3-204ENST00000462236 RHEBL1Q8TAI7 183 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 STAG3L4Q8TBR4 150 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 ZFP90Q8TF47 636 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 HPSE2Q8WWQ2 592 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 DYRK2Q92630 601 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 LGALS12Q96DT0 336 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 FBXO17Q96EF6 278 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 FAM71F1Q96KD3 344 aaPredicted RBP3.99□□□□□ -1.77
COPS3-204ENST00000462236 DOK1Q99704 481 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 RSPO3Q9BXY4 272 aaPredicted RBP3.99□□□□□ -1.77
COPS3-204ENST00000462236 CDC42EP4Q9H3Q1 356 aaKnown RBP3.99□□□□□ -1.77
COPS3-204ENST00000462236 ALG9Q9H6U8 611 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 TMEM185BQ9H7F4 350 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 CAB39LQ9H9S4 337 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 DNAJC4Q9NNZ3 241 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 SLC17A5Q9NRA2 495 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 TAS2R16Q9NYV7 291 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 TAS2R9Q9NYW1 312 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 PSME2Q9UL46 239 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 STUB1Q9UNE7 303 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 WDR83OSQ9Y284 106 aa3.99□□□□□ -1.77
COPS3-204ENST00000462236 LOC105371242A0A075B767 164 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 IGHV3-15A0A0B4J1V0 119 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 ZNF716A6NP11 495 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 M0R1B8 84 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 UPK1AO00322 258 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 ZNF195O14628 629 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 GLRA3O75311 464 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 PNPP00491 289 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 IGKV3-20P01619 116 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 APOHP02749 345 aaPredicted RBP3.98□□□□□ -1.77
COPS3-204ENST00000462236 MSMBP08118 114 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 ADRA2CP18825 462 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 ME2P23368 584 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 PRTN3P24158 256 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 LCN1P31025 176 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 SFTPDP35247 375 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 EIF1P41567 113 aaKnown RBP3.98□□□□□ -1.77
COPS3-204ENST00000462236 GLIPR1P48060 266 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 PSMD4P55036 377 aaKnown RBP3.98□□□□□ -1.77
COPS3-204ENST00000462236 SNRPD2P62316 118 aaKnown RBP3.98□□□□□ -1.77
COPS3-204ENST00000462236 MZT1Q08AG7 82 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 RASGEF1BQ0VAM2 473 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 FOXF1Q12946 379 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 CD226Q15762 336 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 TMEM176BQ3YBM2 270 aaPredicted RBP3.98□□□□□ -1.77
COPS3-204ENST00000462236 PHLDA2Q53GA4 152 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 TCHHL1Q5QJ38 904 aaPredicted RBP3.98□□□□□ -1.77
COPS3-204ENST00000462236 OR4A47Q6IF82 309 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 TRAT1Q6PIZ9 186 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 CCDC137Q6PK04 289 aaKnown RBP3.98□□□□□ -1.77
COPS3-204ENST00000462236 MSANTD1Q6ZTZ1 278 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 GOLGA7Q7Z5G4 137 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 CARM1Q86X55 608 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 MISPQ8IVT2 679 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 MMD2Q8IY49 270 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 CDK20Q8IZL9 346 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 CENPLQ8N0S6 344 aaPredicted RBP3.98□□□□□ -1.77
COPS3-204ENST00000462236 MAGOHBQ96A72 148 aaKnown RBP3.98□□□□□ -1.77
COPS3-204ENST00000462236 RBBP8Q99708 897 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 SLC6A7Q99884 636 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 CITED1Q99966 193 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 CITED2Q99967 270 aaPredicted RBP3.98□□□□□ -1.77
COPS3-204ENST00000462236 DESI2Q9BSY9 194 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 TBL1XR1Q9BZK7 514 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 SHCBP1LQ9BZQ2 653 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 RAB1BQ9H0U4 201 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 TSPY26PQ9H489 355 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 ZNF442Q9H7R0 627 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 SLC52A3Q9NQ40 469 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 PPANQ9NQ55 473 aaKnown RBP3.98□□□□□ -1.77
COPS3-204ENST00000462236 TIGARQ9NQ88 270 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 CA10Q9NS85 328 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 TAS2R7Q9NYW3 318 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 AHSPQ9NZD4 102 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 PDP1Q9P0J1 537 aaPredicted RBP3.98□□□□□ -1.77
COPS3-204ENST00000462236 OPN4Q9UHM6 478 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 ZNF225Q9UK10 706 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 MOKQ9UQ07 419 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 CHMP2BQ9UQN3 213 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 TMED3Q9Y3Q3 217 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 OR10H1Q9Y4A9 318 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 ZNF780BQ9Y6R6 833 aa3.98□□□□□ -1.77
COPS3-204ENST00000462236 IGHV1-18A0A0C4DH31 117 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 SUPT3HB4E1H0 165 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 C9JVG2 144 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 CLDN34H7C241 214 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 GMFGO60234 142 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 SUPT3HO75486 399 aa3.97□□□□□ -1.77
COPS3-204ENST00000462236 PIAS1O75925 651 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms