RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 GLRA1P23415 457 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ARNTP27540 789 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 PSMB6P28072 239 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 RPL12P30050 165 aaKnown RBP8.23□□□□□ -1.09
BRCA1-205ENST00000461221 AGFG1P52594 562 aaKnown RBP8.23□□□□□ -1.09
BRCA1-205ENST00000461221 LSRQ86X29 649 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ZNF561Q8N587 486 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ZFP62Q8NB50 900 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-205ENST00000461221 OR4C5Q8NGB2 326 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 C2CD4CQ8TF44 421 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 SLC39A7Q92504 469 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 MENTQ9BUN1 341 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 HES7Q9BYE0 225 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 UCK1Q9HA47 277 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 FGF21Q9NSA1 209 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 A0A1B0GVG6 124 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 C7orf72A4D263 438 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 MYADML2A6NDP7 307 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 PRRG2O14669 202 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ZNF207O43670 478 aaKnown RBP8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ADAM11O75078 769 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 LRRC26Q2I0M4 334 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ZNF534Q76KX8 674 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 OR5AS1Q8N127 324 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 GABRG1Q8N1C3 465 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 MFSD4AQ8N468 514 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ANGPTL6Q8NI99 470 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ZC3HAV1LQ96H79 300 aaKnown RBP8.23□□□□□ -1.09
BRCA1-205ENST00000461221 CXorf58Q96LI9 332 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 DDOQ99489 341 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 WDR61Q9GZS3 305 aaKnown RBP8.23□□□□□ -1.09
BRCA1-205ENST00000461221 GAREM1Q9H706 876 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 ACOXLQ9NUZ1 547 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 PSENENQ9NZ42 101 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 FER1L4A9Z1Z3 1794 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 RNASEK-C17orf49H0YIS7 233 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 CLEC2LP0C7M8 214 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 CD80P33681 288 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 RFC3P40938 356 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 DGAT2L6Q6ZPD8 337 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 NLRC3Q7RTR2 1065 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 TMEFF1Q8IYR6 380 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 OR2AK2Q8NG84 335 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 OR10AD1Q8NGE0 317 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 CHST8Q9H2A9 424 aa8.23□□□□□ -1.09
BRCA1-205ENST00000461221 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 LOC102723971A0A1B0GUV8 181 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 GJA4P35212 333 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 KRTDAPP60985 99 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 JAG1P78504 1218 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 HSF1Q00613 529 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 ZNF628Q5EBL2 1059 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 TMEM81Q6P7N7 255 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 PTRH1Q86Y79 214 aaKnown RBP8.22□□□□□ -1.09
BRCA1-205ENST00000461221 TMEM102Q8N9M5 508 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-205ENST00000461221 DTWD2Q8NBA8 298 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 RLN3Q8WXF3 142 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 ST8SIA4Q92187 359 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 SLAMF8Q9P0V8 285 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 A0A0B4J203 849 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 GPR37O15354 613 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 ALX3O95076 343 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 AKR7A3O95154 331 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 TBXA2RP21731 343 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 HOXD9P28356 352 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-205ENST00000461221 SRP9P49458 86 aaKnown RBP8.22□□□□□ -1.09
BRCA1-205ENST00000461221 CSNK1G2P78368 415 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 TMEM268Q5VZI3 342 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 CGB2Q6NT52 195 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 DHRS4L2Q6PKH6 230 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 BHLHE23Q8NDY6 225 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 OR2A1Q8NGT9 310 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 ARRDC3Q96B67 414 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 PINX1Q96BK5 328 aaKnown RBP8.22□□□□□ -1.09
BRCA1-205ENST00000461221 HAPLN2Q9GZV7 340 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 PARP12Q9H0J9 701 aaKnown RBP8.22□□□□□ -1.09
BRCA1-205ENST00000461221 ASIC5Q9NY37 505 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 PROCRQ9UNN8 238 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 ZNF320A2RRD8 509 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 SIRPB1O00241 398 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 S100A4P26447 101 aaKnown RBP8.22□□□□□ -1.09
BRCA1-205ENST00000461221 TEAD1P28347 426 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 CTU2Q2VPK5 515 aaKnown RBP8.22□□□□□ -1.09
BRCA1-205ENST00000461221 THEM4Q5T1C6 240 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 OTUD1Q5VV17 481 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-205ENST00000461221 RHOUQ7L0Q8 258 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 LRP10Q7Z4F1 713 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 TMEM40Q8WWA1 233 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 IP6K3Q96PC2 410 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 KIR3DX1Q9H7L2 352 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 CSNK1G1Q9HCP0 422 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 LYRM2Q9NU23 88 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-205ENST00000461221 HRH3Q9Y5N1 445 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 HS3ST3A1Q9Y663 406 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 MEIKINA0A087WXM9 373 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 FITM1A5D6W6 292 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 B3GALNT1O75752 331 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 CD37P11049 281 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 NID1P14543 1247 aa8.22□□□□□ -1.09
BRCA1-205ENST00000461221 ELAVL1Q15717 326 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms