RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 CLHC1Q8NHS4 586 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 ZNF564Q8TBZ8 553 aaPredicted RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 SLC7A13Q8TCU3 470 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 ZNF689Q96CS4 500 aaPredicted RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 C9orf72Q96LT7 481 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 OR5M11Q96RB7 305 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 SELENOSQ9BQE4 189 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 ACBD6Q9BR61 282 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 RAB1BQ9H0U4 201 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 CSNK1G1Q9HCP0 422 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 IL26Q9NPH9 171 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 ZC4H2Q9NQZ6 224 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 CLEC5AQ9NY25 188 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 ADA2Q9NZK5 511 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 UXTQ9UBK9 157 aaPredicted RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 CD300AQ9UGN4 299 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 MMP17Q9ULZ9 603 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 UBQLN1Q9UMX0 589 aaKnown RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 LRRC42Q9Y546 428 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 MEGF6O75095 1541 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 KCPQ6ZWJ8 1503 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 MAST2Q6P0Q8 1798 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 ZNF142P52746 1687 aaPredicted RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 PHLPP1O60346 1717 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 TOGARAM1Q9Y4F4 1720 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 TRAV6A0A075B6T7 132 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 IGHV3-35A0A0C4DH35 117 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 A0A0J9YWU9 116 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 A0A1B0GU03 582 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 A0A1W2PPR1 153 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 IQCF5A8MTL0 148 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 A8MUA0 341 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 BTNL10A8MVZ5 291 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 E7ENQ6 273 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 HSBP1O75506 76 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 DUSP14O95147 198 aaKnown RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 FARS2O95363 451 aaKnown RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 KLK3P07288 261 aaPredicted RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 UGT1A3P35503 534 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 SPAM1P38567 509 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 PPP1R2P41236 205 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 SLC25A1P53007 311 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 TLE4Q04727 773 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 CD47Q08722 323 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 NCF4Q15080 339 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 TNFAIP8L3Q5GJ75 292 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 TRIM40Q6P9F5 258 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 SPESP1Q6UW49 350 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 NDUFAF7Q7L592 441 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 ARCQ7LC44 396 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 ERO1BQ86YB8 467 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 SKA3Q8IX90 412 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 ARHGAP18Q8N392 663 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 LIX1Q8N485 282 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 FTMTQ8N4E7 242 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 TRAM1L1Q8N609 369 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 EID2Q8N6I1 236 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 METTL13Q8N6R0 699 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 FNDC5Q8NAU1 212 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 PDCD6IPQ8WUM4 868 aaKnown RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 FAM131CQ96AQ9 280 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 APH1AQ96BI3 265 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 PGLYRP4Q96LB8 373 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 TSSK3Q96PN8 268 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 SORT1Q99523 831 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 SH3GL1Q99961 368 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 PAIP2Q9BPZ3 127 aaKnown RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 SOSTQ9BQB4 213 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 CHID1Q9BWS9 393 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 TRIM4Q9C037 500 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 PIGUQ9H490 435 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 GOLPH3Q9H4A6 298 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 RNF167Q9H6Y7 350 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 CWH43Q9H720 699 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 NTN4Q9HB63 628 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.27□□□□□ -2.05
HPS3-203ENST00000460822 FGFR1OP2Q9NVK5 253 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 GIN1Q9NXP7 522 aa2.27□□□□□ -2.05
HPS3-203ENST00000460822 UTP11Q9Y3A2 253 aaKnown RBP2.27□□□□□ -2.05
HPS3-203ENST00000460822 TNS3Q68CZ2 1445 aa2.26□□□□□ -2.05
HPS3-203ENST00000460822 CNTNAP1P78357 1384 aa2.26□□□□□ -2.05
HPS3-203ENST00000460822 MROH7Q68CQ1 1323 aa2.26□□□□□ -2.05
HPS3-203ENST00000460822 NAV1Q8NEY1 1877 aa2.26□□□□□ -2.05
HPS3-203ENST00000460822 COL1A1P02452 1464 aaPredicted RBP2.26□□□□□ -2.05
HPS3-203ENST00000460822 ITGB4P16144 1822 aa2.26□□□□□ -2.05
HPS3-203ENST00000460822 IGLV3-22A0A075B6J6 115 aa2.26□□□□□ -2.05
HPS3-203ENST00000460822 IGHV1OR15-1A0A075B7D0 117 aa2.26□□□□□ -2.05
HPS3-203ENST00000460822 A0A087X0T9 212 aa2.26□□□□□ -2.05
HPS3-203ENST00000460822 RAB19A4D1S5 217 aa2.26□□□□□ -2.05
HPS3-203ENST00000460822 FAM231BA6NCW3 169 aa2.26□□□□□ -2.05
HPS3-203ENST00000460822 SMIM23A6NLE4 172 aa2.26□□□□□ -2.05
HPS3-203ENST00000460822 EEDO75530 441 aaKnown RBP2.26□□□□□ -2.05
HPS3-203ENST00000460822 ETHE1O95571 254 aa2.26□□□□□ -2.05
HPS3-203ENST00000460822 CLIC3O95833 236 aa2.26□□□□□ -2.05
HPS3-203ENST00000460822 TBX6O95947 436 aaPredicted RBP2.26□□□□□ -2.05
HPS3-203ENST00000460822 CD160O95971 181 aa2.26□□□□□ -2.05
HPS3-203ENST00000460822 IGHV2-5P01817 119 aa2.26□□□□□ -2.05
HPS3-203ENST00000460822 DCNP07585 359 aaKnown RBP2.26□□□□□ -2.05
HPS3-203ENST00000460822 FAM228BP0C875 321 aa2.26□□□□□ -2.05
HPS3-203ENST00000460822 CTRB1P17538 263 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms