RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 GRIP1Q9Y3R0 1128 aa13.85□□□□□ -0.19
CPSF6-203ENST00000456847 U3KQV3 271 aa13.85□□□□□ -0.19
CPSF6-203ENST00000456847 IGLV1-36A0A0B4J1U3 117 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 DCTN6O00399 190 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 PPIHO43447 177 aaKnown RBP13.84□□□□□ -0.19
CPSF6-203ENST00000456847 SPRY3O43610 288 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 IDH3BO43837 385 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 TIMM8AO60220 97 aaPredicted RBP13.84□□□□□ -0.19
CPSF6-203ENST00000456847 LILRA1O75019 489 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 HLA-DQA2P01906 255 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 GAAP10253 952 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 HMGA2P52926 109 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 TEKQ02763 1124 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.84□□□□□ -0.192e-6■■□□□ 14.4
CPSF6-203ENST00000456847 OR1F12Q8NHA8 337 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 SHARPINQ9H0F6 387 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 RACGAP1Q9H0H5 632 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 NKIRAS2Q9NYR9 191 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 SONP18583 2426 aaKnown RBP13.84□□□□□ -0.19
CPSF6-203ENST00000456847 RER1O15258 196 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 ICMTO60725 284 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 TGFAP01135 160 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 IL2RGP31785 369 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 MRPS11P82912 194 aaKnown RBP13.84□□□□□ -0.19
CPSF6-203ENST00000456847 KCNMB1Q16558 191 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 CCDC92Q53HC0 331 aaPredicted RBP13.84□□□□□ -0.19
CPSF6-203ENST00000456847 OR6V1Q8N148 313 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 SLC7A6Q92536 515 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 BEX2Q9BXY8 128 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 SAP30LQ9HAJ7 183 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 CYSLTR2Q9NS75 346 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 TBCCD1Q9NVR7 557 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 TMEM160Q9NX00 188 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 VNN3Q9NY84 501 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 FAM53CQ9NYF3 392 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 LPAR3Q9UBY5 353 aa13.84□□□□□ -0.19
CPSF6-203ENST00000456847 MALRD1Q5VYJ5 2156 aa13.83□□□□□ -0.2
CPSF6-203ENST00000456847 KIAA1324LA8MWY0 1029 aaPredicted RBP13.83□□□□□ -0.2
CPSF6-203ENST00000456847 UBOX5O94941 541 aa13.83□□□□□ -0.2
CPSF6-203ENST00000456847 GASTP01350 101 aa13.83□□□□□ -0.2
CPSF6-203ENST00000456847 RAP2AP10114 183 aa13.83□□□□□ -0.2
CPSF6-203ENST00000456847 SLC36A3Q495N2 470 aa13.83□□□□□ -0.2
CPSF6-203ENST00000456847 DNAL1Q4LDG9 190 aa13.83□□□□□ -0.2
CPSF6-203ENST00000456847 ZMAT1Q5H9K5 638 aa13.83□□□□□ -0.2
CPSF6-203ENST00000456847 USP51Q70EK9 711 aa13.83□□□□□ -0.2
CPSF6-203ENST00000456847 GJC3Q8NFK1 279 aa13.83□□□□□ -0.2
CPSF6-203ENST00000456847 HPS1Q92902 700 aa13.83□□□□□ -0.2
CPSF6-203ENST00000456847 SOX7Q9BT81 388 aa13.83□□□□□ -0.2
CPSF6-203ENST00000456847 CGGBP1Q9UFW8 167 aaPredicted RBP13.83□□□□□ -0.2
CPSF6-203ENST00000456847 IGHV1-69-2A0A0G2JMI3 117 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 OR6C6A6NF89 314 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 GYG2O15488 501 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 IGFBP5P24593 272 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 LIPAP38571 399 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 DBPQ10586 325 aaPredicted RBP13.82□□□□□ -0.2
CPSF6-203ENST00000456847 TMEM255AQ5JRV8 349 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 CORO6Q6QEF8 472 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 RASSF6Q6ZTQ3 369 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 LINC00346Q8IVM7 164 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 SLC26A10Q8NG04 563 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 COG8Q96MW5 612 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 CDADC1Q9BWV3 514 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 PLA2G12AQ9BZM1 189 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 HDHD2Q9H0R4 259 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 POFUT1Q9H488 388 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 ATPIF1Q9UII2 106 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 LHFPL6Q9Y693 200 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 OR6C68A6NDL8 312 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 ZSCAN5BA6NJL1 495 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 RP2O75695 350 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 IFNA2P01563 188 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 IGHV1-46P01743 117 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 MMP15P51511 669 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 TMEM33P57088 247 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 TRAP1Q12931 704 aaKnown RBP13.82□□□□□ -0.2
CPSF6-203ENST00000456847 MICAQ29983 383 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 FAM209AQ5JX71 171 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 ZNF770Q6IQ21 691 aaPredicted RBP13.82□□□□□ -0.2
CPSF6-203ENST00000456847 LINC01356Q8N9X3 169 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 OR2AJ1Q8NGZ0 328 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 ELMOD3Q96FG2 381 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 DCLRE1CQ96SD1 692 aaKnown RBP13.82□□□□□ -0.2
CPSF6-203ENST00000456847 TSSK6Q9BXA6 273 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 EGLN1Q9GZT9 426 aa13.82□□□□□ -0.2
CPSF6-203ENST00000456847 ABCA2Q9BZC7 2435 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 BHLHE40O14503 412 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 GNGT2O14610 69 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 SOX14O95416 240 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 CST1P01037 141 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 DBHP09172 617 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 HNF1AP20823 631 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 IL17RELQ6ZVW7 336 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 ZBTB46Q86UZ6 589 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 CYB561A3Q8NBI2 242 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 PROKR2Q8NFJ6 384 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 OR10G2Q8NGC3 310 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 OR8D4Q8NGM9 314 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 CLDND2Q8NHS1 167 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 COQ7Q99807 217 aa13.81□□□□□ -0.2
CPSF6-203ENST00000456847 MSL2Q9HCI7 577 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms