RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 SCRN3Q0VDG4 424 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 KEAP1Q14145 624 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 EIF2B1Q14232 305 aaKnown RBP12.15□□□□□ -0.46
TIMP1-205ENST00000456754 SMN1Q16637 294 aaKnown RBP12.15□□□□□ -0.46
TIMP1-205ENST00000456754 PCK2Q16822 640 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 C3orf36Q3SXR2 165 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 ZNF672Q499Z4 452 aaPredicted RBP12.15□□□□□ -0.46
TIMP1-205ENST00000456754 SLC35D3Q5M8T2 416 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 ZNF691Q5VV52 312 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 IZUMO2Q6UXV1 221 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 DPPA2Q7Z7J5 298 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 SYT9Q86SS6 491 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 NAA40Q86UY6 237 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 ZNF101Q8IZC7 436 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 DHRSXQ8N5I4 330 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 OR1F12Q8NHA8 337 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 CNIH3Q8TBE1 160 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 ST7LQ8TDW4 575 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 RDH12Q96NR8 316 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 POFUT1Q9H488 388 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 AMBNQ9NP70 447 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 C8orf4Q9NR00 106 aa12.15□□□□□ -0.46
TIMP1-205ENST00000456754 LRBAP50851 2863 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 PSMD9O00233 223 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 NGFP01138 241 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 CRYAAP02489 173 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 CAPGP40121 348 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 IL5RAQ01344 420 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 PLP2Q04941 152 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 SNTB2Q13425 540 aaKnown RBP12.14□□□□□ -0.47
TIMP1-205ENST00000456754 MAD2L1BPQ15013 274 aaPredicted RBP12.14□□□□□ -0.47
TIMP1-205ENST00000456754 RAB35Q15286 201 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 ELFN2Q5R3F8 820 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 LAIR2Q6ISS4 152 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 RFPL4BQ6ZWI9 263 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 SSX8Q7RTT4 187 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 OR4F15Q8NGB8 312 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 OR51G2Q8NGK0 314 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 OR2AJ1Q8NGZ0 328 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 RHOXF1Q8NHV9 184 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 TBX5Q99593 518 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 RHNO1Q9BSD3 238 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 ABHD6Q9BV23 337 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 H2AFY2Q9P0M6 372 aaPredicted RBP12.14□□□□□ -0.47
TIMP1-205ENST00000456754 POU2F3Q9UKI9 436 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 FZR1Q9UM11 496 aa12.14□□□□□ -0.47
TIMP1-205ENST00000456754 CSMD2Q7Z408 3487 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 HS3ST1O14792 307 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 ADRA2AP08913 450 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 HTR1FP30939 366 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 APLNRP35414 380 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 THBS4P35443 961 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 GDI2P50395 445 aaKnown RBP12.13□□□□□ -0.47
TIMP1-205ENST00000456754 PRSS12P56730 875 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 NKX6-1P78426 367 aaPredicted RBP12.13□□□□□ -0.47
TIMP1-205ENST00000456754 GGTLC2Q14390 218 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 OCLNQ16625 522 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 TBC1D28Q2M2D7 210 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 TMEM255AQ5JRV8 349 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 TEX30Q5JUR7 227 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 SPATA46Q5T0L3 261 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 LCN1P1Q5VSP4 162 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 SSX6Q7RTT6 188 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 GJC3Q8NFK1 279 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 TFAP2CQ92754 450 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 SLAMF6Q96DU3 332 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 KCNS3Q9BQ31 491 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 CDH20Q9HBT6 801 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 CENPMQ9NSP4 180 aa12.13□□□□□ -0.47
TIMP1-205ENST00000456754 CISD1Q9NZ45 108 aaKnown RBP12.13□□□□□ -0.47
TIMP1-205ENST00000456754 SMPD2O60906 423 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 SOD3P08294 240 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 NR4A1P22736 598 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 ISL1P61371 349 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 GALK2Q01415 458 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 KRTAP27-1Q3LI81 207 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 C1QTNF12Q5T7M4 302 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 USP51Q70EK9 711 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 SLC16A9Q7RTY1 509 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 LRP11Q86VZ4 500 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 GID4Q8IVV7 300 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 SLC35F2Q8IXU6 374 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 DEPDC4Q8N2C3 294 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 OTOSQ8NHW6 89 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 THEM6Q8WUY1 208 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 TRUB1Q8WWH5 349 aaKnown RBP12.12□□□□□ -0.47
TIMP1-205ENST00000456754 RNFT2Q96EX2 444 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 LURAP1Q96LR2 239 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 CNN2Q99439 309 aaKnown RBP12.12□□□□□ -0.47
TIMP1-205ENST00000456754 ATF6BQ99941 703 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 VCXQ9H320 206 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 C1orf198Q9H425 327 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 FBXL3Q9UKT7 428 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 PLEKHA6Q9Y2H5 1048 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 GRIP1Q9Y3R0 1128 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 PCDHGB5Q9Y5G0 923 aa12.12□□□□□ -0.47
TIMP1-205ENST00000456754 USF3Q68DE3 2245 aa12.11□□□□□ -0.47
TIMP1-205ENST00000456754 TACC2O95359 2948 aa12.11□□□□□ -0.47
TIMP1-205ENST00000456754 SLC22A31A6NKX4 558 aa12.11□□□□□ -0.47
TIMP1-205ENST00000456754 F5H5K5 113 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms