RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 NMNAT3Q96T66 252 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 MNTQ99583 582 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 C1QTNF5Q9BXJ0 243 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 POLE4Q9NR33 117 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 TMEM38BQ9NVV0 291 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 BOKQ9UMX3 212 aaPredicted RBP4.31□□□□□ -1.72
RIF1-207ENST00000454583 FAM32AQ9Y421 112 aaKnown RBP4.31□□□□□ -1.72
RIF1-207ENST00000454583 CMAHPQ9Y471 501 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 A0A1W2PPR1 153 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 KLRC4-KLRK1H3BQV0 150 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 AGRPO00253 132 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 OR2T1O43869 369 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 MPZL1O95297 269 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 FAM87AP0C7U9 286 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 EPXP11678 715 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 IL7P13232 177 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 ELK1P19419 428 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 MMP15P51511 669 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 CCR9P51686 369 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 OR12D2P58182 307 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 DHODHQ02127 395 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 SLC25A35Q3KQZ1 300 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 LAMTOR1Q6IAA8 161 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 LINC00696Q6ZRV3 163 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 SYT9Q86SS6 491 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 GDPD1Q8N9F7 314 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 CPT1CQ8TCG5 803 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 SMAP2Q8WU79 429 aaPredicted RBP4.31□□□□□ -1.72
RIF1-207ENST00000454583 INTS12Q96CB8 462 aaKnown RBP4.31□□□□□ -1.72
RIF1-207ENST00000454583 NEDD4LQ96PU5 975 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 WNT5BQ9H1J7 359 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 TMEM27Q9HBJ8 222 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 GPR35Q9HC97 309 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 ABCB9Q9NP78 766 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 VDAC3Q9Y277 283 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 OR10H1Q9Y4A9 318 aa4.31□□□□□ -1.72
RIF1-207ENST00000454583 C12orf71A8MTZ7 269 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 LOC110117498-PIK3R3F6TDL0 507 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 DYRK3O43781 588 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 VAMP5O95183 116 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 CST2P09228 141 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 COX5BP10606 129 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 GP1BBP13224 206 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 ATF1P18846 271 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 HLA-DMAP28067 261 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 RORCP51449 518 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 ACTC1P68032 377 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 ACTA1P68133 377 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 SRSF4Q08170 494 aaKnown RBP4.3□□□□□ -1.72
RIF1-207ENST00000454583 PLA2G7Q13093 441 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 SNAPC1Q16533 368 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 ALG10Q5BKT4 473 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 Q5BKY6 102 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 THEM4Q5T1C6 240 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 PDSS1Q5T2R2 415 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 C22orf42Q6IC83 251 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 ZNF100Q8IYN0 542 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 STX19Q8N4C7 294 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 OR1K1Q8NGR3 316 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 MCFD2Q8NI22 146 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 ABTB1Q969K4 478 aaPredicted RBP4.3□□□□□ -1.72
RIF1-207ENST00000454583 YIPF5Q969M3 257 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 UPRTQ96BW1 309 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 SLC25A18Q9H1K4 315 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 GLRX2Q9NS18 164 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 SLC25A15Q9Y619 301 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 LOC100509620A0A075B734 347 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 A0A1B0GTH9 108 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 SELENOFO60613 162 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 EIF1BO60739 113 aaKnown RBP4.3□□□□□ -1.72
RIF1-207ENST00000454583 PRKAR1AP10644 381 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 IFNGR1P15260 489 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 WNT5AP41221 380 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 CCL11P51671 97 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 HCCSP53701 268 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 PER3P56645 1201 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 OR10A3P58181 314 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 MFGE8Q08431 387 aaPredicted RBP4.3□□□□□ -1.72
RIF1-207ENST00000454583 MFSD13AQ14CX5 517 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 C3AR1Q16581 482 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 RGS21Q2M5E4 152 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 MST1LQ2TV78 715 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 OLFML2AQ68BL7 652 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 CASP12Q6UXS9 341 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 B3GLCTQ6Y288 498 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 SLC22A16Q86VW1 577 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 KLHL36Q8N4N3 616 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 ACBD7Q8N6N7 88 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 CELF2-AS1Q8N7Q2 184 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 TMEM178AQ8NBL3 297 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 POM121L2Q96KW2 1035 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 TSSK2Q96PF2 358 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 ABHD1Q96SE0 405 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 CHCHD6Q9BRQ6 235 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 NUAK2Q9H093 628 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 GHITMQ9H3K2 345 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 METTL7AQ9H8H3 244 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 MED29Q9NX70 200 aa4.3□□□□□ -1.72
RIF1-207ENST00000454583 PAQR5Q9NXK6 330 aaPredicted RBP4.3□□□□□ -1.72
RIF1-207ENST00000454583 SLC5A6Q9Y289 635 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms